Sophie

• Search
• Distribution
• Explorer
• Source & Patches
• Chat
• Help
• About

distrib > Mandriva > 2010.0 > i586 > media > contrib-release > by-pkgid > 23ca751bfc1231ffa913026adc49110d > files

emboss-6.1.0-1mdv2010.0.i586.rpm

• Info
• Deps
• Files
• Scripts
• ChangeLog
• Location
• Others versions
• Analyse

Files

-rw-r--r--	17455	root	root	/etc/emboss.default
-rw-r--r--	56	root	root	/etc/profile.d/emboss.csh
-rw-r--r--	56	root	root	/etc/profile.d/emboss.sh
-rwxr-xr-x	5516	root	root	/usr/bin/aaindexextract
-rwxr-xr-x	13896	root	root	/usr/bin/abiview
-rwxr-xr-x	5456	root	root	/usr/bin/acdc
-rwxr-xr-x	5460	root	root	/usr/bin/acdpretty
-rwxr-xr-x	5460	root	root	/usr/bin/acdtable
-rwxr-xr-x	5460	root	root	/usr/bin/acdtrace
-rwxr-xr-x	5460	root	root	/usr/bin/acdvalid
-rwxr-xr-x	5504	root	root	/usr/bin/aligncopy
-rwxr-xr-x	5520	root	root	/usr/bin/aligncopypair
-rwxr-xr-x	13840	root	root	/usr/bin/antigenic
-rwxr-xr-x	5532	root	root	/usr/bin/backtranambig
-rwxr-xr-x	5528	root	root	/usr/bin/backtranseq
-rwxr-xr-x	13768	root	root	/usr/bin/banana
-rwxr-xr-x	9652	root	root	/usr/bin/biosed
-rwxr-xr-x	9640	root	root	/usr/bin/btwisted
-rwxr-xr-x	5512	root	root	/usr/bin/cai
-rwxr-xr-x	9620	root	root	/usr/bin/chaos
-rwxr-xr-x	9732	root	root	/usr/bin/charge
-rwxr-xr-x	9700	root	root	/usr/bin/checktrans
-rwxr-xr-x	5528	root	root	/usr/bin/chips
-rwxr-xr-x	30232	root	root	/usr/bin/cirdna
-rwxr-xr-x	5472	root	root	/usr/bin/codcmp
-rwxr-xr-x	5464	root	root	/usr/bin/codcopy
-rwxr-xr-x	9716	root	root	/usr/bin/coderet
-rwxr-xr-x	13824	root	root	/usr/bin/compseq
-rwxr-xr-x	9660	root	root	/usr/bin/cons
-rwxr-xr-x	9648	root	root	/usr/bin/consambig
-rwxr-xr-x	13860	root	root	/usr/bin/cpgplot
-rwxr-xr-x	9652	root	root	/usr/bin/cpgreport
-rwxr-xr-x	5520	root	root	/usr/bin/cusp
-rwxr-xr-x	13852	root	root	/usr/bin/cutgextract
-rwxr-xr-x	5504	root	root	/usr/bin/cutseq
-rwxr-xr-x	13884	root	root	/usr/bin/dan
-rwxr-xr-x	26352	root	root	/usr/bin/dbiblast
-rwxr-xr-x	18060	root	root	/usr/bin/dbifasta
-rwxr-xr-x	26328	root	root	/usr/bin/dbiflat
-rwxr-xr-x	30432	root	root	/usr/bin/dbigcg
-rwxr-xr-x	13864	root	root	/usr/bin/dbxfasta
-rwxr-xr-x	13896	root	root	/usr/bin/dbxflat
-rwxr-xr-x	26192	root	root	/usr/bin/dbxgcg
-rwxr-xr-x	5500	root	root	/usr/bin/degapseq
-rwxr-xr-x	13812	root	root	/usr/bin/density
-rwxr-xr-x	5508	root	root	/usr/bin/descseq
-rwxr-xr-x	18028	root	root	/usr/bin/diffseq
-rwxr-xr-x	9700	root	root	/usr/bin/digest-emboss
-rwxr-xr-x	26108	root	root	/usr/bin/distmat
-rwxr-xr-x	18028	root	root	/usr/bin/dotmatcher
-rwxr-xr-x	9656	root	root	/usr/bin/dotpath
-rwxr-xr-x	13856	root	root	/usr/bin/dottup
-rwxr-xr-x	9660	root	root	/usr/bin/dreg
-rwxr-xr-x	79496	root	root	/usr/bin/edialign
-rwxr-xr-x	13820	root	root	/usr/bin/einverted
-rwxr-xr-x	9696	root	root	/usr/bin/embossdata
-rwxr-xr-x	9600	root	root	/usr/bin/embossversion
-rwxr-xr-x	13864	root	root	/usr/bin/emma-emboss
-rwxr-xr-x	18040	root	root	/usr/bin/emowse
-rwxr-xr-x	5480	root	root	/usr/bin/entret
-rwxr-xr-x	17996	root	root	/usr/bin/epestfind
-rwxr-xr-x	22124	root	root	/usr/bin/eprimer3
-rwxr-xr-x	9668	root	root	/usr/bin/equicktandem
-rwxr-xr-x	13792	root	root	/usr/bin/est2genome
-rwxr-xr-x	9668	root	root	/usr/bin/etandem
-rwxr-xr-x	5516	root	root	/usr/bin/extractalign
-rwxr-xr-x	17992	root	root	/usr/bin/extractfeat
-rwxr-xr-x	9672	root	root	/usr/bin/extractseq
-rwxr-xr-x	5464	root	root	/usr/bin/featcopy
-rwxr-xr-x	5476	root	root	/usr/bin/featreport
-rwxr-xr-x	9688	root	root	/usr/bin/findkm
-rwxr-xr-x	9712	root	root	/usr/bin/freak
-rwxr-xr-x	5524	root	root	/usr/bin/fuzznuc
-rwxr-xr-x	5520	root	root	/usr/bin/fuzzpro
-rwxr-xr-x	9732	root	root	/usr/bin/fuzztran
-rwxr-xr-x	26644	root	root	/usr/bin/garnier
-rwxr-xr-x	5492	root	root	/usr/bin/geecee
-rwxr-xr-x	13792	root	root	/usr/bin/getorf
-rwxr-xr-x	13920	root	root	/usr/bin/helixturnhelix
-rwxr-xr-x	9712	root	root	/usr/bin/hmoment
-rwxr-xr-x	9740	root	root	/usr/bin/iep
-rwxr-xr-x	13800	root	root	/usr/bin/infoalign
-rwxr-xr-x	5492	root	root	/usr/bin/infobase
-rwxr-xr-x	9652	root	root	/usr/bin/inforesidue
-rwxr-xr-x	9668	root	root	/usr/bin/infoseq
-rwxr-xr-x	9660	root	root	/usr/bin/isochore
-rwxr-xr-x	9648	root	root	/usr/bin/jaspextract
-rwxr-xr-x	22100	root	root	/usr/bin/jaspscan
-rwxr-xr-x	5440	root	root	/usr/bin/jembossctl
-rwxr-xr-x	26100	root	root	/usr/bin/lindna
-rwxr-xr-x	9620	root	root	/usr/bin/listor
-rwxr-xr-x	9668	root	root	/usr/bin/makenucseq
-rwxr-xr-x	9704	root	root	/usr/bin/makeprotseq
-rwxr-xr-x	13792	root	root	/usr/bin/marscan
-rwxr-xr-x	5480	root	root	/usr/bin/maskambignuc
-rwxr-xr-x	5480	root	root	/usr/bin/maskambigprot
-rwxr-xr-x	9684	root	root	/usr/bin/maskfeat
-rwxr-xr-x	5528	root	root	/usr/bin/maskseq
-rwxr-xr-x	26084	root	root	/usr/bin/matcher
-rwxr-xr-x	9696	root	root	/usr/bin/megamerger
-rwxr-xr-x	13820	root	root	/usr/bin/merger-emboss
-rwxr-xr-x	13764	root	root	/usr/bin/msbar
-rwxr-xr-x	9628	root	root	/usr/bin/mwcontam
-rwxr-xr-x	9640	root	root	/usr/bin/mwfilter
-rwxr-xr-x	9684	root	root	/usr/bin/needle
-rwxr-xr-x	9640	root	root	/usr/bin/newcpgreport
-rwxr-xr-x	9616	root	root	/usr/bin/newcpgseek
-rwxr-xr-x	5508	root	root	/usr/bin/newseq
-rwxr-xr-x	5476	root	root	/usr/bin/nohtml
-rwxr-xr-x	5492	root	root	/usr/bin/noreturn
-rwxr-xr-x	5476	root	root	/usr/bin/nospace
-rwxr-xr-x	5512	root	root	/usr/bin/notab
-rwxr-xr-x	9644	root	root	/usr/bin/notseq
-rwxr-xr-x	5492	root	root	/usr/bin/nthseq
-rwxr-xr-x	5488	root	root	/usr/bin/nthseqset
-rwxr-xr-x	9688	root	root	/usr/bin/octanol
-rwxr-xr-x	13808	root	root	/usr/bin/oddcomp
-rwxr-xr-x	9628	root	root	/usr/bin/palindrome
-rwxr-xr-x	5524	root	root	/usr/bin/pasteseq
-rwxr-xr-x	9656	root	root	/usr/bin/patmatdb
-rwxr-xr-x	9696	root	root	/usr/bin/patmatmotifs
-rwxr-xr-x	13872	root	root	/usr/bin/pepcoil
-rwxr-xr-x	13884	root	root	/usr/bin/pepinfo
-rwxr-xr-x	9656	root	root	/usr/bin/pepnet
-rwxr-xr-x	9676	root	root	/usr/bin/pepstats
-rwxr-xr-x	9660	root	root	/usr/bin/pepwheel
-rwxr-xr-x	9684	root	root	/usr/bin/pepwindow
-rwxr-xr-x	13820	root	root	/usr/bin/pepwindowall
-rwxr-xr-x	9684	root	root	/usr/bin/plotcon
-rwxr-xr-x	9708	root	root	/usr/bin/plotorf
-rwxr-xr-x	9708	root	root	/usr/bin/polydot
-rwxr-xr-x	9640	root	root	/usr/bin/preg
-rwxr-xr-x	26172	root	root	/usr/bin/prettyplot
-rwxr-xr-x	9684	root	root	/usr/bin/prettyseq
-rwxr-xr-x	13836	root	root	/usr/bin/primersearch
-rwxr-xr-x	13752	root	root	/usr/bin/printsextract
-rwxr-xr-x	13748	root	root	/usr/bin/profit
-rwxr-xr-x	13784	root	root	/usr/bin/prophecy
-rwxr-xr-x	13780	root	root	/usr/bin/prophet
-rwxr-xr-x	9628	root	root	/usr/bin/prosextract
-rwxr-xr-x	9648	root	root	/usr/bin/pscan
-rwxr-xr-x	13776	root	root	/usr/bin/psiphi
-rwxr-xr-x	17912	root	root	/usr/bin/rebaseextract
-rwxr-xr-x	18028	root	root	/usr/bin/recoder
-rwxr-xr-x	9656	root	root	/usr/bin/redata
-rwxr-xr-x	22232	root	root	/usr/bin/remap
-rwxr-xr-x	13848	root	root	/usr/bin/restover
-rwxr-xr-x	22160	root	root	/usr/bin/restrict
-rwxr-xr-x	5512	root	root	/usr/bin/revseq
-rwxr-xr-x	945	root	root	/usr/bin/runJemboss.csh
-rwxr-xr-x	5508	root	root	/usr/bin/seealso
-rwxr-xr-x	9640	root	root	/usr/bin/seqmatchall
-rwxr-xr-x	5480	root	root	/usr/bin/seqret
-rwxr-xr-x	5476	root	root	/usr/bin/seqretsetall
-rwxr-xr-x	9636	root	root	/usr/bin/seqretsplit
-rwxr-xr-x	17976	root	root	/usr/bin/showalign
-rwxr-xr-x	13744	root	root	/usr/bin/showdb
-rwxr-xr-x	17960	root	root	/usr/bin/showfeat
-rwxr-xr-x	13764	root	root	/usr/bin/showorf
-rwxr-xr-x	13916	root	root	/usr/bin/showpep
-rwxr-xr-x	18116	root	root	/usr/bin/showseq
-rwxr-xr-x	5504	root	root	/usr/bin/shuffleseq
-rwxr-xr-x	13900	root	root	/usr/bin/sigcleave
-rwxr-xr-x	13892	root	root	/usr/bin/silent
-rwxr-xr-x	13880	root	root	/usr/bin/sirna
-rwxr-xr-x	13836	root	root	/usr/bin/sixpack
-rwxr-xr-x	5484	root	root	/usr/bin/sizeseq
-rwxr-xr-x	9664	root	root	/usr/bin/skipredundant
-rwxr-xr-x	5480	root	root	/usr/bin/skipseq
-rwxr-xr-x	9720	root	root	/usr/bin/splitsource
-rwxr-xr-x	9712	root	root	/usr/bin/splitter
-rwxr-xr-x	13796	root	root	/usr/bin/stretcher
-rwxr-xr-x	9684	root	root	/usr/bin/stssearch
-rwxr-xr-x	13860	root	root	/usr/bin/supermatcher
-rwxr-xr-x	9740	root	root	/usr/bin/syco
-rwxr-xr-x	13864	root	root	/usr/bin/tcode
-rwxr-xr-x	9628	root	root	/usr/bin/textsearch
-rwxr-xr-x	9600	root	root	/usr/bin/tfextract
-rwxr-xr-x	9676	root	root	/usr/bin/tfm
-rwxr-xr-x	9704	root	root	/usr/bin/tfscan
-rwxr-xr-x	17920	root	root	/usr/bin/tmap
-rwxr-xr-x	9720	root	root	/usr/bin/tranalign
-rwxr-xr-x	9668	root	root	/usr/bin/transeq
-rwxr-xr-x	9656	root	root	/usr/bin/trimest
-rwxr-xr-x	9628	root	root	/usr/bin/trimseq
-rwxr-xr-x	5476	root	root	/usr/bin/trimspace
-rwxr-xr-x	13872	root	root	/usr/bin/twofeat
-rwxr-xr-x	9692	root	root	/usr/bin/union
-rwxr-xr-x	18020	root	root	/usr/bin/vectorstrip
-rwxr-xr-x	9684	root	root	/usr/bin/water
-rwxr-xr-x	9660	root	root	/usr/bin/whichdb
-rwxr-xr-x	9736	root	root	/usr/bin/wobble
-rwxr-xr-x	5496	root	root	/usr/bin/wordcount-emboss
-rwxr-xr-x	13876	root	root	/usr/bin/wordfinder
-rwxr-xr-x	9648	root	root	/usr/bin/wordmatch
-rwxr-xr-x	5492	root	root	/usr/bin/wossname
-rwxr-xr-x	5472	root	root	/usr/bin/yank-emboss
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS
drwxr-xr-x	12288	root	root	/usr/share/EMBOSS/acd
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/doc
lrwxrwxrwx	27	root	root	/usr/share/EMBOSS/emboss.default
-rw-r--r--	17480	root	root	/usr/share/EMBOSS/emboss.default.template
-rw-r--r--	6424	root	root	/usr/share/EMBOSS/plstnd5.fnt
-rw-r--r--	58808	root	root	/usr/share/EMBOSS/plxtnd5.fnt
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test
-rw-r--r--	375	root	root	/usr/share/EMBOSS/acd/aaindexextract.acd
-rw-r--r--	1577	root	root	/usr/share/EMBOSS/acd/abiview.acd
-rw-r--r--	98	root	root	/usr/share/EMBOSS/acd/acdc.acd
-rw-r--r--	152	root	root	/usr/share/EMBOSS/acd/acdlog.acd
-rw-r--r--	117	root	root	/usr/share/EMBOSS/acd/acdpretty.acd
-rw-r--r--	157	root	root	/usr/share/EMBOSS/acd/acdtable.acd
-rw-r--r--	357	root	root	/usr/share/EMBOSS/acd/acdtrace.acd
-rw-r--r--	106	root	root	/usr/share/EMBOSS/acd/acdvalid.acd
-rw-r--r--	1439	root	root	/usr/share/EMBOSS/acd/ajbad.acd
-rw-r--r--	433	root	root	/usr/share/EMBOSS/acd/ajfeatest.acd
-rw-r--r--	862	root	root	/usr/share/EMBOSS/acd/ajtest.acd
-rw-r--r--	1482	root	root	/usr/share/EMBOSS/acd/aligncopy.acd
-rw-r--r--	1380	root	root	/usr/share/EMBOSS/acd/aligncopypair.acd
-rw-r--r--	716	root	root	/usr/share/EMBOSS/acd/antigenic.acd
-rw-r--r--	1491	root	root	/usr/share/EMBOSS/acd/backtranambig.acd
-rw-r--r--	546	root	root	/usr/share/EMBOSS/acd/backtranseq.acd
-rw-r--r--	911	root	root	/usr/share/EMBOSS/acd/banana.acd
-rw-r--r--	1100	root	root	/usr/share/EMBOSS/acd/biosed.acd
-rw-r--r--	752	root	root	/usr/share/EMBOSS/acd/btwisted.acd
-rw-r--r--	480	root	root	/usr/share/EMBOSS/acd/cai.acd
-rw-r--r--	471	root	root	/usr/share/EMBOSS/acd/chaos.acd
-rw-r--r--	982	root	root	/usr/share/EMBOSS/acd/charge.acd
-rw-r--r--	1524	root	root	/usr/share/EMBOSS/acd/checktrans.acd
-rw-r--r--	599	root	root	/usr/share/EMBOSS/acd/chips.acd
-rw-r--r--	4152	root	root	/usr/share/EMBOSS/acd/cirdna.acd
-rw-r--r--	522	root	root	/usr/share/EMBOSS/acd/codcmp.acd
-rw-r--r--	454	root	root	/usr/share/EMBOSS/acd/codcopy.acd
-rw-r--r--	1474	root	root	/usr/share/EMBOSS/acd/coderet.acd
-rw-r--r--	1917	root	root	/usr/share/EMBOSS/acd/codes.english
-rw-r--r--	2154	root	root	/usr/share/EMBOSS/acd/complex.acd
-rw-r--r--	4594	root	root	/usr/share/EMBOSS/acd/compseq.acd
-rw-r--r--	2321	root	root	/usr/share/EMBOSS/acd/cons.acd
-rw-r--r--	752	root	root	/usr/share/EMBOSS/acd/consambig.acd
-rw-r--r--	487	root	root	/usr/share/EMBOSS/acd/corbatest.acd
-rw-r--r--	2933	root	root	/usr/share/EMBOSS/acd/cpgplot.acd
-rw-r--r--	956	root	root	/usr/share/EMBOSS/acd/cpgreport.acd
-rw-r--r--	436	root	root	/usr/share/EMBOSS/acd/cusp.acd
-rw-r--r--	1563	root	root	/usr/share/EMBOSS/acd/cutgextract.acd
-rw-r--r--	1128	root	root	/usr/share/EMBOSS/acd/cutseq.acd
-rw-r--r--	4856	root	root	/usr/share/EMBOSS/acd/dan.acd
-rw-r--r--	2985	root	root	/usr/share/EMBOSS/acd/dbiblast.acd
-rw-r--r--	2817	root	root	/usr/share/EMBOSS/acd/dbifasta.acd
-rw-r--r--	2834	root	root	/usr/share/EMBOSS/acd/dbiflat.acd
-rw-r--r--	2854	root	root	/usr/share/EMBOSS/acd/dbigcg.acd
-rw-r--r--	2427	root	root	/usr/share/EMBOSS/acd/dbxfasta.acd
-rw-r--r--	2377	root	root	/usr/share/EMBOSS/acd/dbxflat.acd
-rw-r--r--	2379	root	root	/usr/share/EMBOSS/acd/dbxgcg.acd
-rw-r--r--	1338	root	root	/usr/share/EMBOSS/acd/dbxreport.acd
-rw-r--r--	1542	root	root	/usr/share/EMBOSS/acd/dbxstat.acd
-rw-r--r--	405	root	root	/usr/share/EMBOSS/acd/degapseq.acd
-rw-r--r--	1332	root	root	/usr/share/EMBOSS/acd/density.acd
-rw-r--r--	1132	root	root	/usr/share/EMBOSS/acd/descseq.acd
-rw-r--r--	2828	root	root	/usr/share/EMBOSS/acd/diffseq.acd
-rw-r--r--	3228	root	root	/usr/share/EMBOSS/acd/digest.acd
-rw-r--r--	3328	root	root	/usr/share/EMBOSS/acd/distmat.acd
-rw-r--r--	1693	root	root	/usr/share/EMBOSS/acd/dotmatcher.acd
-rw-r--r--	1225	root	root	/usr/share/EMBOSS/acd/dotpath.acd
-rw-r--r--	1216	root	root	/usr/share/EMBOSS/acd/dottup.acd
-rw-r--r--	563	root	root	/usr/share/EMBOSS/acd/dreg.acd
-rw-r--r--	2987	root	root	/usr/share/EMBOSS/acd/edialign.acd
-rw-r--r--	1643	root	root	/usr/share/EMBOSS/acd/einverted.acd
-rw-r--r--	1769	root	root	/usr/share/EMBOSS/acd/embossdata.acd
-rw-r--r--	514	root	root	/usr/share/EMBOSS/acd/embossversion.acd
-rw-r--r--	15419	root	root	/usr/share/EMBOSS/acd/emma.acd
-rw-r--r--	1928	root	root	/usr/share/EMBOSS/acd/emowse.acd
-rw-r--r--	560	root	root	/usr/share/EMBOSS/acd/entrails.acd
-rw-r--r--	704	root	root	/usr/share/EMBOSS/acd/entret.acd
-rw-r--r--	2970	root	root	/usr/share/EMBOSS/acd/epestfind.acd
-rw-r--r--	32939	root	root	/usr/share/EMBOSS/acd/eprimer3.acd
-rw-r--r--	1013	root	root	/usr/share/EMBOSS/acd/equicktandem.acd
-rw-r--r--	4110	root	root	/usr/share/EMBOSS/acd/est2genome.acd
-rw-r--r--	1587	root	root	/usr/share/EMBOSS/acd/etandem.acd
-rw-r--r--	1044	root	root	/usr/share/EMBOSS/acd/extractalign.acd
-rw-r--r--	9615	root	root	/usr/share/EMBOSS/acd/extractfeat.acd
-rw-r--r--	1593	root	root	/usr/share/EMBOSS/acd/extractseq.acd
-rw-r--r--	422	root	root	/usr/share/EMBOSS/acd/featcopy.acd
-rw-r--r--	460	root	root	/usr/share/EMBOSS/acd/featreport.acd
-rw-r--r--	742	root	root	/usr/share/EMBOSS/acd/findkm.acd
-rw-r--r--	1148	root	root	/usr/share/EMBOSS/acd/freak.acd
-rw-r--r--	2167	root	root	/usr/share/EMBOSS/acd/fuzznuc.acd
-rw-r--r--	1996	root	root	/usr/share/EMBOSS/acd/fuzzpro.acd
-rw-r--r--	3434	root	root	/usr/share/EMBOSS/acd/fuzztran.acd
-rw-r--r--	1276	root	root	/usr/share/EMBOSS/acd/garnier.acd
-rw-r--r--	443	root	root	/usr/share/EMBOSS/acd/geecee.acd
-rw-r--r--	4315	root	root	/usr/share/EMBOSS/acd/getorf.acd
-rw-r--r--	1076	root	root	/usr/share/EMBOSS/acd/giep.acd
-rw-r--r--	2386	root	root	/usr/share/EMBOSS/acd/groups.standard
-rw-r--r--	1177	root	root	/usr/share/EMBOSS/acd/helixturnhelix.acd
-rw-r--r--	1032	root	root	/usr/share/EMBOSS/acd/histogramtest.acd
-rw-r--r--	1295	root	root	/usr/share/EMBOSS/acd/hmoment.acd
-rw-r--r--	1629	root	root	/usr/share/EMBOSS/acd/iep.acd
-rw-r--r--	4485	root	root	/usr/share/EMBOSS/acd/infoalign.acd
-rw-r--r--	944	root	root	/usr/share/EMBOSS/acd/infobase.acd
-rw-r--r--	1334	root	root	/usr/share/EMBOSS/acd/inforesidue.acd
-rw-r--r--	3127	root	root	/usr/share/EMBOSS/acd/infoseq.acd
-rw-r--r--	635	root	root	/usr/share/EMBOSS/acd/intconv.acd
-rw-r--r--	888	root	root	/usr/share/EMBOSS/acd/isochore.acd
-rw-r--r--	509	root	root	/usr/share/EMBOSS/acd/jaspextract.acd
-rw-r--r--	3123	root	root	/usr/share/EMBOSS/acd/jaspscan.acd
-rw-r--r--	387	root	root	/usr/share/EMBOSS/acd/keywords.standard
-rw-r--r--	22828	root	root	/usr/share/EMBOSS/acd/knowntypes.standard
-rw-r--r--	4061	root	root	/usr/share/EMBOSS/acd/lindna.acd
-rw-r--r--	1730	root	root	/usr/share/EMBOSS/acd/listor.acd
-rw-r--r--	1460	root	root	/usr/share/EMBOSS/acd/makenucseq.acd
-rw-r--r--	1432	root	root	/usr/share/EMBOSS/acd/makeprotseq.acd
-rw-r--r--	883	root	root	/usr/share/EMBOSS/acd/marscan.acd
-rw-r--r--	658	root	root	/usr/share/EMBOSS/acd/maskambignuc.acd
-rw-r--r--	653	root	root	/usr/share/EMBOSS/acd/maskambigprot.acd
-rw-r--r--	2377	root	root	/usr/share/EMBOSS/acd/maskfeat.acd
-rw-r--r--	2195	root	root	/usr/share/EMBOSS/acd/maskseq.acd
-rw-r--r--	2967	root	root	/usr/share/EMBOSS/acd/matcher.acd
-rw-r--r--	1594	root	root	/usr/share/EMBOSS/acd/megamerger.acd
-rw-r--r--	1435	root	root	/usr/share/EMBOSS/acd/merger.acd
-rw-r--r--	3448	root	root	/usr/share/EMBOSS/acd/msbar.acd
-rw-r--r--	778	root	root	/usr/share/EMBOSS/acd/mwcontam.acd
-rw-r--r--	1121	root	root	/usr/share/EMBOSS/acd/mwfilter.acd
-rw-r--r--	2730	root	root	/usr/share/EMBOSS/acd/needle.acd
-rw-r--r--	1430	root	root	/usr/share/EMBOSS/acd/newcoils.acd
-rw-r--r--	1235	root	root	/usr/share/EMBOSS/acd/newcpgreport.acd
-rw-r--r--	693	root	root	/usr/share/EMBOSS/acd/newcpgseek.acd
-rw-r--r--	1605	root	root	/usr/share/EMBOSS/acd/newseq.acd
-rw-r--r--	853	root	root	/usr/share/EMBOSS/acd/nohtml.acd
-rw-r--r--	836	root	root	/usr/share/EMBOSS/acd/noreturn.acd
-rw-r--r--	844	root	root	/usr/share/EMBOSS/acd/nospace.acd
-rw-r--r--	843	root	root	/usr/share/EMBOSS/acd/notab.acd
-rw-r--r--	1627	root	root	/usr/share/EMBOSS/acd/notseq.acd
-rw-r--r--	651	root	root	/usr/share/EMBOSS/acd/nthseq.acd
-rw-r--r--	796	root	root	/usr/share/EMBOSS/acd/nthseqset.acd
-rw-r--r--	1263	root	root	/usr/share/EMBOSS/acd/octanol.acd
-rw-r--r--	2103	root	root	/usr/share/EMBOSS/acd/oddcomp.acd
-rw-r--r--	973	root	root	/usr/share/EMBOSS/acd/origsplitter.acd
-rw-r--r--	410	root	root	/usr/share/EMBOSS/acd/origunion.acd
-rw-r--r--	1366	root	root	/usr/share/EMBOSS/acd/palindrome.acd
-rw-r--r--	914	root	root	/usr/share/EMBOSS/acd/pasteseq.acd
-rw-r--r--	1123	root	root	/usr/share/EMBOSS/acd/patmatdb.acd
-rw-r--r--	1109	root	root	/usr/share/EMBOSS/acd/patmatmotifs.acd
-rw-r--r--	607	root	root	/usr/share/EMBOSS/acd/patmattest.acd
-rw-r--r--	1050	root	root	/usr/share/EMBOSS/acd/pepcoil.acd
-rw-r--r--	1352	root	root	/usr/share/EMBOSS/acd/pepinfo.acd
-rw-r--r--	1487	root	root	/usr/share/EMBOSS/acd/pepnet.acd
-rw-r--r--	1142	root	root	/usr/share/EMBOSS/acd/pepstats.acd
-rw-r--r--	2260	root	root	/usr/share/EMBOSS/acd/pepwheel.acd
-rw-r--r--	1023	root	root	/usr/share/EMBOSS/acd/pepwindow.acd
-rw-r--r--	1098	root	root	/usr/share/EMBOSS/acd/pepwindowall.acd
-rw-r--r--	1224	root	root	/usr/share/EMBOSS/acd/plotcon.acd
-rw-r--r--	758	root	root	/usr/share/EMBOSS/acd/plotorf.acd
-rw-r--r--	1379	root	root	/usr/share/EMBOSS/acd/polydot.acd
-rw-r--r--	564	root	root	/usr/share/EMBOSS/acd/preg.acd
-rw-r--r--	6032	root	root	/usr/share/EMBOSS/acd/prettyplot.acd
-rw-r--r--	2181	root	root	/usr/share/EMBOSS/acd/prettyseq.acd
-rw-r--r--	3583	root	root	/usr/share/EMBOSS/acd/prima.acd
-rw-r--r--	3108	root	root	/usr/share/EMBOSS/acd/primers.acd
-rw-r--r--	817	root	root	/usr/share/EMBOSS/acd/primersearch.acd
-rw-r--r--	377	root	root	/usr/share/EMBOSS/acd/printsextract.acd
-rw-r--r--	585	root	root	/usr/share/EMBOSS/acd/profit.acd
-rw-r--r--	1907	root	root	/usr/share/EMBOSS/acd/prophecy.acd
-rw-r--r--	1028	root	root	/usr/share/EMBOSS/acd/prophet.acd
-rw-r--r--	399	root	root	/usr/share/EMBOSS/acd/prosextract.acd
-rw-r--r--	880	root	root	/usr/share/EMBOSS/acd/pscan.acd
-rw-r--r--	1378	root	root	/usr/share/EMBOSS/acd/psiphi.acd
-rw-r--r--	792	root	root	/usr/share/EMBOSS/acd/rebaseextract.acd
-rw-r--r--	1050	root	root	/usr/share/EMBOSS/acd/recoder.acd
-rw-r--r--	1100	root	root	/usr/share/EMBOSS/acd/redata.acd
-rw-r--r--	11421	root	root	/usr/share/EMBOSS/acd/remap.acd
-rw-r--r--	2579	root	root	/usr/share/EMBOSS/acd/restover.acd
-rw-r--r--	6812	root	root	/usr/share/EMBOSS/acd/restrict.acd
-rw-r--r--	858	root	root	/usr/share/EMBOSS/acd/revseq.acd
-rw-r--r--	1451	root	root	/usr/share/EMBOSS/acd/sections.standard
-rw-r--r--	4716	root	root	/usr/share/EMBOSS/acd/seealso.acd
-rw-r--r--	426	root	root	/usr/share/EMBOSS/acd/seqinfo.acd
-rw-r--r--	677	root	root	/usr/share/EMBOSS/acd/seqmatchall.acd
-rw-r--r--	705	root	root	/usr/share/EMBOSS/acd/seqret.acd
-rw-r--r--	424	root	root	/usr/share/EMBOSS/acd/seqretall.acd
-rw-r--r--	453	root	root	/usr/share/EMBOSS/acd/seqretallfeat.acd
-rw-r--r--	562	root	root	/usr/share/EMBOSS/acd/seqretset.acd
-rw-r--r--	560	root	root	/usr/share/EMBOSS/acd/seqretsetall.acd
-rw-r--r--	534	root	root	/usr/share/EMBOSS/acd/seqretsingle.acd
-rw-r--r--	709	root	root	/usr/share/EMBOSS/acd/seqretsplit.acd
-rw-r--r--	1631	root	root	/usr/share/EMBOSS/acd/seqrettype.acd
-rw-r--r--	7738	root	root	/usr/share/EMBOSS/acd/showalign.acd
-rw-r--r--	2972	root	root	/usr/share/EMBOSS/acd/showdb.acd
-rw-r--r--	10776	root	root	/usr/share/EMBOSS/acd/showfeat.acd
-rw-r--r--	2264	root	root	/usr/share/EMBOSS/acd/showorf.acd
-rw-r--r--	8994	root	root	/usr/share/EMBOSS/acd/showpep.acd
-rw-r--r--	19281	root	root	/usr/share/EMBOSS/acd/showseq.acd
-rw-r--r--	619	root	root	/usr/share/EMBOSS/acd/shuffleseq.acd
-rw-r--r--	1128	root	root	/usr/share/EMBOSS/acd/sigcleave.acd
-rw-r--r--	1140	root	root	/usr/share/EMBOSS/acd/silent.acd
-rw-r--r--	4215	root	root	/usr/share/EMBOSS/acd/sirna.acd
-rw-r--r--	5217	root	root	/usr/share/EMBOSS/acd/sixpack.acd
-rw-r--r--	1100	root	root	/usr/share/EMBOSS/acd/sizeseq.acd
-rw-r--r--	5778	root	root	/usr/share/EMBOSS/acd/skipredundant.acd
-rw-r--r--	656	root	root	/usr/share/EMBOSS/acd/skipseq.acd
-rw-r--r--	722	root	root	/usr/share/EMBOSS/acd/splitsource.acd
-rw-r--r--	1098	root	root	/usr/share/EMBOSS/acd/splitter.acd
-rw-r--r--	1507	root	root	/usr/share/EMBOSS/acd/stretcher.acd
-rw-r--r--	573	root	root	/usr/share/EMBOSS/acd/stssearch.acd
-rw-r--r--	2148	root	root	/usr/share/EMBOSS/acd/supermatcher.acd
-rw-r--r--	1182	root	root	/usr/share/EMBOSS/acd/syco.acd
-rw-r--r--	2319	root	root	/usr/share/EMBOSS/acd/tcode.acd
-rw-r--r--	555	root	root	/usr/share/EMBOSS/acd/testplot.acd
-rw-r--r--	2086	root	root	/usr/share/EMBOSS/acd/textsearch.acd
-rw-r--r--	411	root	root	/usr/share/EMBOSS/acd/tfextract.acd
-rw-r--r--	1288	root	root	/usr/share/EMBOSS/acd/tfm.acd
-rw-r--r--	1404	root	root	/usr/share/EMBOSS/acd/tfscan.acd
-rw-r--r--	653	root	root	/usr/share/EMBOSS/acd/tmap.acd
-rw-r--r--	1559	root	root	/usr/share/EMBOSS/acd/tranalign.acd
-rw-r--r--	3837	root	root	/usr/share/EMBOSS/acd/transeq.acd
-rw-r--r--	214	root	root	/usr/share/EMBOSS/acd/treetypedisplay.acd
-rw-r--r--	3270	root	root	/usr/share/EMBOSS/acd/trimest.acd
-rw-r--r--	2086	root	root	/usr/share/EMBOSS/acd/trimseq.acd
-rw-r--r--	848	root	root	/usr/share/EMBOSS/acd/trimspace.acd
-rw-r--r--	14251	root	root	/usr/share/EMBOSS/acd/twofeat.acd
-rw-r--r--	1015	root	root	/usr/share/EMBOSS/acd/union.acd
-rw-r--r--	2017	root	root	/usr/share/EMBOSS/acd/variables.standard
-rw-r--r--	1668	root	root	/usr/share/EMBOSS/acd/vectorstrip.acd
-rw-r--r--	2596	root	root	/usr/share/EMBOSS/acd/water.acd
-rw-r--r--	751	root	root	/usr/share/EMBOSS/acd/whichdb.acd
-rw-r--r--	930	root	root	/usr/share/EMBOSS/acd/wobble.acd
-rw-r--r--	914	root	root	/usr/share/EMBOSS/acd/wordcount.acd
-rw-r--r--	2682	root	root	/usr/share/EMBOSS/acd/wordfinder.acd
-rw-r--r--	970	root	root	/usr/share/EMBOSS/acd/wordmatch.acd
-rw-r--r--	5977	root	root	/usr/share/EMBOSS/acd/wossname.acd
-rw-r--r--	602	root	root	/usr/share/EMBOSS/acd/yank.acd
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/AAINDEX
drwxr-xr-x	12288	root	root	/usr/share/EMBOSS/data/CODONS
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM30
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM35
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM40
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM45
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM50
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM55
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM60
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM62
-rw-r--r--	2144	root	root	/usr/share/EMBOSS/data/EBLOSUM62-12
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM65
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM70
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM75
-rw-r--r--	2124	root	root	/usr/share/EMBOSS/data/EBLOSUM80
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM85
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/EBLOSUM90
-rw-r--r--	2121	root	root	/usr/share/EMBOSS/data/EBLOSUMN
-rw-r--r--	1298	root	root	/usr/share/EMBOSS/data/EDNAFULL
-rw-r--r--	1242	root	root	/usr/share/EMBOSS/data/EDNAMAT
-rw-r--r--	834	root	root	/usr/share/EMBOSS/data/EGC.0
-rw-r--r--	1106	root	root	/usr/share/EMBOSS/data/EGC.1
-rw-r--r--	776	root	root	/usr/share/EMBOSS/data/EGC.10
-rw-r--r--	2030	root	root	/usr/share/EMBOSS/data/EGC.11
-rw-r--r--	1341	root	root	/usr/share/EMBOSS/data/EGC.12
-rw-r--r--	1635	root	root	/usr/share/EMBOSS/data/EGC.13
-rw-r--r--	1420	root	root	/usr/share/EMBOSS/data/EGC.14
-rw-r--r--	781	root	root	/usr/share/EMBOSS/data/EGC.15
-rw-r--r--	823	root	root	/usr/share/EMBOSS/data/EGC.16
-rw-r--r--	1177	root	root	/usr/share/EMBOSS/data/EGC.2
-rw-r--r--	1627	root	root	/usr/share/EMBOSS/data/EGC.21
-rw-r--r--	1813	root	root	/usr/share/EMBOSS/data/EGC.22
-rw-r--r--	1003	root	root	/usr/share/EMBOSS/data/EGC.23
-rw-r--r--	1642	root	root	/usr/share/EMBOSS/data/EGC.3
-rw-r--r--	1936	root	root	/usr/share/EMBOSS/data/EGC.4
-rw-r--r--	2363	root	root	/usr/share/EMBOSS/data/EGC.5
-rw-r--r--	1449	root	root	/usr/share/EMBOSS/data/EGC.6
-rw-r--r--	980	root	root	/usr/share/EMBOSS/data/EGC.9
-rw-r--r--	775	root	root	/usr/share/EMBOSS/data/EGC.index
-rw-r--r--	28985	root	root	/usr/share/EMBOSS/data/EGC.txt
-rw-r--r--	482	root	root	/usr/share/EMBOSS/data/ENUC.4.2
-rw-r--r--	1171	root	root	/usr/share/EMBOSS/data/ENUC.4.4
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM10
-rw-r--r--	2066	root	root	/usr/share/EMBOSS/data/EPAM100
-rw-r--r--	2066	root	root	/usr/share/EMBOSS/data/EPAM110
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM120
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM130
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM140
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM150
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM160
-rw-r--r--	2668	root	root	/usr/share/EMBOSS/data/EPAM170
-rw-r--r--	2668	root	root	/usr/share/EMBOSS/data/EPAM180
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM190
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM20
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM200
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM210
-rw-r--r--	2067	root	root	/usr/share/EMBOSS/data/EPAM220
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM230
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM240
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM250
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM260
-rw-r--r--	2669	root	root	/usr/share/EMBOSS/data/EPAM270
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM280
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM290
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM30
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM300
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM310
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM320
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM330
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM340
-rw-r--r--	2669	root	root	/usr/share/EMBOSS/data/EPAM350
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM360
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM370
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM380
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM390
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM40
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM400
-rw-r--r--	2669	root	root	/usr/share/EMBOSS/data/EPAM410
-rw-r--r--	2669	root	root	/usr/share/EMBOSS/data/EPAM420
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM430
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM440
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/EPAM450
-rw-r--r--	2069	root	root	/usr/share/EMBOSS/data/EPAM460
-rw-r--r--	2671	root	root	/usr/share/EMBOSS/data/EPAM470
-rw-r--r--	2671	root	root	/usr/share/EMBOSS/data/EPAM480
-rw-r--r--	2070	root	root	/usr/share/EMBOSS/data/EPAM490
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM50
-rw-r--r--	2070	root	root	/usr/share/EMBOSS/data/EPAM500
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM60
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM70
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM80
-rw-r--r--	2666	root	root	/usr/share/EMBOSS/data/EPAM90
-rw-r--r--	501	root	root	/usr/share/EMBOSS/data/Eaa_acc_surface.dat
-rw-r--r--	627	root	root	/usr/share/EMBOSS/data/Eaa_hydropathy.dat
-rw-r--r--	594	root	root	/usr/share/EMBOSS/data/Eaa_properties.dat
-rw-r--r--	2577	root	root	/usr/share/EMBOSS/data/Eamino.dat
-rw-r--r--	192	root	root	/usr/share/EMBOSS/data/Eangles.dat
-rw-r--r--	1022	root	root	/usr/share/EMBOSS/data/Eangles_tri.dat
-rw-r--r--	3833	root	root	/usr/share/EMBOSS/data/Eantigenic.dat
-rw-r--r--	418	root	root	/usr/share/EMBOSS/data/Ebases.iub
-rw-r--r--	412	root	root	/usr/share/EMBOSS/data/Edayhoff.freq
-rw-r--r--	917	root	root	/usr/share/EMBOSS/data/Edna.melt
-rw-r--r--	357	root	root	/usr/share/EMBOSS/data/Eembl.ior
-rw-r--r--	184	root	root	/usr/share/EMBOSS/data/Eenergy.dat
-rw-r--r--	41854	root	root	/usr/share/EMBOSS/data/Efeatures.embl
-rw-r--r--	647	root	root	/usr/share/EMBOSS/data/Efeatures.emboss
-rw-r--r--	1189	root	root	/usr/share/EMBOSS/data/Efeatures.gff
-rw-r--r--	39655	root	root	/usr/share/EMBOSS/data/Efeatures.gff3
-rw-r--r--	10464	root	root	/usr/share/EMBOSS/data/Efeatures.gff3protein
-rw-r--r--	10521	root	root	/usr/share/EMBOSS/data/Efeatures.gffprotein
-rw-r--r--	1323	root	root	/usr/share/EMBOSS/data/Efeatures.pir
-rw-r--r--	1032	root	root	/usr/share/EMBOSS/data/Efeatures.protein
-rw-r--r--	12295	root	root	/usr/share/EMBOSS/data/Efeatures.swiss
-rw-r--r--	997000	root	root	/usr/share/EMBOSS/data/Efreqs.dat
-rw-r--r--	325074	root	root	/usr/share/EMBOSS/data/Ehet.dat
-rw-r--r--	1929	root	root	/usr/share/EMBOSS/data/Ehth.dat
-rw-r--r--	1791	root	root	/usr/share/EMBOSS/data/Ehth87.dat
-rw-r--r--	563	root	root	/usr/share/EMBOSS/data/Emass.dat
-rw-r--r--	1200	root	root	/usr/share/EMBOSS/data/Emassmod.dat
-rw-r--r--	7226	root	root	/usr/share/EMBOSS/data/Ememe.dat
-rw-r--r--	423	root	root	/usr/share/EMBOSS/data/Emethylsites.dat
-rw-r--r--	1027	root	root	/usr/share/EMBOSS/data/Emolwt.dat
-rw-r--r--	793	root	root	/usr/share/EMBOSS/data/Emwfilter.dat
-rw-r--r--	1390	root	root	/usr/share/EMBOSS/data/Enakai.dat
-rw-r--r--	1445	root	root	/usr/share/EMBOSS/data/Epepcoil.dat
-rw-r--r--	341	root	root	/usr/share/EMBOSS/data/Epk.dat
-rw-r--r--	2120	root	root	/usr/share/EMBOSS/data/Epprofile
-rw-r--r--	417	root	root	/usr/share/EMBOSS/data/Eprior1.plib
-rw-r--r--	10006	root	root	/usr/share/EMBOSS/data/Eprior30.plib
-rw-r--r--	609	root	root	/usr/share/EMBOSS/data/Eresidues.iub
-rw-r--r--	799	root	root	/usr/share/EMBOSS/data/Erna.melt
-rw-r--r--	1732	root	root	/usr/share/EMBOSS/data/Esig.euk
-rw-r--r--	1731	root	root	/usr/share/EMBOSS/data/Esig.pro
-rw-r--r--	8456	root	root	/usr/share/EMBOSS/data/Etags.embl
-rw-r--r--	254	root	root	/usr/share/EMBOSS/data/Etags.emboss
-rw-r--r--	771	root	root	/usr/share/EMBOSS/data/Etags.gff
-rw-r--r--	2461	root	root	/usr/share/EMBOSS/data/Etags.gff3
-rw-r--r--	37	root	root	/usr/share/EMBOSS/data/Etags.gff3protein
-rw-r--r--	37	root	root	/usr/share/EMBOSS/data/Etags.gffprotein
-rw-r--r--	26	root	root	/usr/share/EMBOSS/data/Etags.pir
-rw-r--r--	37	root	root	/usr/share/EMBOSS/data/Etags.protein
-rw-r--r--	36	root	root	/usr/share/EMBOSS/data/Etags.swiss
-rw-r--r--	793	root	root	/usr/share/EMBOSS/data/Etcode.dat
-rw-r--r--	9040	root	root	/usr/share/EMBOSS/data/Evdw.dat
-rw-r--r--	980	root	root	/usr/share/EMBOSS/data/Ewhite-wimley.dat
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/JASPAR_CNE
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/JASPAR_CORE
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/JASPAR_FAM
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/JASPAR_PHYLOFACTS
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/JASPAR_POLII
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/JASPAR_SPLICE
-rw-r--r--	223	root	root	/usr/share/EMBOSS/data/Matrices.nucleotide
-rw-r--r--	4614	root	root	/usr/share/EMBOSS/data/Matrices.protein
-rw-r--r--	154	root	root	/usr/share/EMBOSS/data/Matrices.proteinstructure
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/PRINTS
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/PROSITE
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/data/REBASE
-rw-r--r--	91	root	root	/usr/share/EMBOSS/data/SSSUB
-rw-r--r--	1409	root	root	/usr/share/EMBOSS/data/edialignmat
-rw-r--r--	12506	root	root	/usr/share/EMBOSS/data/embossre.equ
-rw-r--r--	16041	root	root	/usr/share/EMBOSS/data/tp400_dna
-rw-r--r--	205595	root	root	/usr/share/EMBOSS/data/tp400_prot
-rw-r--r--	205599	root	root	/usr/share/EMBOSS/data/tp400_trans
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/AAINDEX/dummyfile
-rw-r--r--	8090	root	root	/usr/share/EMBOSS/data/CODONS/Cut.index
-rw-r--r--	2100	root	root	/usr/share/EMBOSS/data/CODONS/Eacc.cut
-rw-r--r--	2514	root	root	/usr/share/EMBOSS/data/CODONS/Eacica.cut
-rw-r--r--	2027	root	root	/usr/share/EMBOSS/data/CODONS/Eadenovirus5.cut
-rw-r--r--	2035	root	root	/usr/share/EMBOSS/data/CODONS/Eadenovirus7.cut
-rw-r--r--	2523	root	root	/usr/share/EMBOSS/data/CODONS/Eagrtu.cut
-rw-r--r--	2027	root	root	/usr/share/EMBOSS/data/CODONS/Eaidlav.cut
-rw-r--r--	2499	root	root	/usr/share/EMBOSS/data/CODONS/Eanasp.cut
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/CODONS/Eani.cut
-rw-r--r--	2102	root	root	/usr/share/EMBOSS/data/CODONS/Eani_h.cut
-rw-r--r--	2013	root	root	/usr/share/EMBOSS/data/CODONS/Eanidmit.cut
-rw-r--r--	2510	root	root	/usr/share/EMBOSS/data/CODONS/Earath.cut
-rw-r--r--	2099	root	root	/usr/share/EMBOSS/data/CODONS/Easn.cut
-rw-r--r--	2167	root	root	/usr/share/EMBOSS/data/CODONS/Eath.cut
-rw-r--r--	2102	root	root	/usr/share/EMBOSS/data/CODONS/Eatu.cut
-rw-r--r--	2093	root	root	/usr/share/EMBOSS/data/CODONS/Eavi.cut
-rw-r--r--	2509	root	root	/usr/share/EMBOSS/data/CODONS/Eazovi.cut
-rw-r--r--	2506	root	root	/usr/share/EMBOSS/data/CODONS/Ebacme.cut
-rw-r--r--	2517	root	root	/usr/share/EMBOSS/data/CODONS/Ebacst.cut
-rw-r--r--	2528	root	root	/usr/share/EMBOSS/data/CODONS/Ebacsu.cut
-rw-r--r--	2535	root	root	/usr/share/EMBOSS/data/CODONS/Ebacsu_high.cut
-rw-r--r--	2105	root	root	/usr/share/EMBOSS/data/CODONS/Ebja.cut
-rw-r--r--	2123	root	root	/usr/share/EMBOSS/data/CODONS/Ebly.cut
-rw-r--r--	2090	root	root	/usr/share/EMBOSS/data/CODONS/Ebme.cut
-rw-r--r--	2108	root	root	/usr/share/EMBOSS/data/CODONS/Ebmo.cut
-rw-r--r--	2108	root	root	/usr/share/EMBOSS/data/CODONS/Ebna.cut
-rw-r--r--	2498	root	root	/usr/share/EMBOSS/data/CODONS/Ebommo.cut
-rw-r--r--	2143	root	root	/usr/share/EMBOSS/data/CODONS/Ebov.cut
-rw-r--r--	2498	root	root	/usr/share/EMBOSS/data/CODONS/Ebovin.cut
-rw-r--r--	2172	root	root	/usr/share/EMBOSS/data/CODONS/Ebovsp.cut
-rw-r--r--	2503	root	root	/usr/share/EMBOSS/data/CODONS/Ebpphx.cut
-rw-r--r--	2521	root	root	/usr/share/EMBOSS/data/CODONS/Ebraja.cut
-rw-r--r--	2501	root	root	/usr/share/EMBOSS/data/CODONS/Ebrana.cut
-rw-r--r--	2500	root	root	/usr/share/EMBOSS/data/CODONS/Ebrare.cut
-rw-r--r--	2112	root	root	/usr/share/EMBOSS/data/CODONS/Ebst.cut
-rw-r--r--	2173	root	root	/usr/share/EMBOSS/data/CODONS/Ebsu.cut
-rw-r--r--	2094	root	root	/usr/share/EMBOSS/data/CODONS/Ebsu_h.cut
-rw-r--r--	2088	root	root	/usr/share/EMBOSS/data/CODONS/Ecac.cut
-rw-r--r--	2511	root	root	/usr/share/EMBOSS/data/CODONS/Ecaeel.cut
-rw-r--r--	2108	root	root	/usr/share/EMBOSS/data/CODONS/Ecal.cut
-rw-r--r--	2503	root	root	/usr/share/EMBOSS/data/CODONS/Ecanal.cut
-rw-r--r--	2503	root	root	/usr/share/EMBOSS/data/CODONS/Ecanfa.cut
-rw-r--r--	2515	root	root	/usr/share/EMBOSS/data/CODONS/Ecaucr.cut
-rw-r--r--	2079	root	root	/usr/share/EMBOSS/data/CODONS/Eccr.cut
-rw-r--r--	2140	root	root	/usr/share/EMBOSS/data/CODONS/Ecel.cut
-rw-r--r--	2049	root	root	/usr/share/EMBOSS/data/CODONS/Echi.cut
-rw-r--r--	2501	root	root	/usr/share/EMBOSS/data/CODONS/Echick.cut
-rw-r--r--	2022	root	root	/usr/share/EMBOSS/data/CODONS/Echicken.cut
-rw-r--r--	2176	root	root	/usr/share/EMBOSS/data/CODONS/Echisp.cut
-rw-r--r--	2159	root	root	/usr/share/EMBOSS/data/CODONS/Echk.cut
-rw-r--r--	2512	root	root	/usr/share/EMBOSS/data/CODONS/Echlre.cut
-rw-r--r--	2518	root	root	/usr/share/EMBOSS/data/CODONS/Echltr.cut
-rw-r--r--	2086	root	root	/usr/share/EMBOSS/data/CODONS/Echmp.cut
-rw-r--r--	2107	root	root	/usr/share/EMBOSS/data/CODONS/Echnt.cut
-rw-r--r--	2105	root	root	/usr/share/EMBOSS/data/CODONS/Echos.cut
-rw-r--r--	2094	root	root	/usr/share/EMBOSS/data/CODONS/Echzm.cut
-rw-r--r--	2002	root	root	/usr/share/EMBOSS/data/CODONS/Echzmrubp.cut
-rw-r--r--	2523	root	root	/usr/share/EMBOSS/data/CODONS/Ecloab.cut
-rw-r--r--	2064	root	root	/usr/share/EMBOSS/data/CODONS/Ecpx.cut
-rw-r--r--	2083	root	root	/usr/share/EMBOSS/data/CODONS/Ecre.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Ecrigr.cut
-rw-r--r--	2115	root	root	/usr/share/EMBOSS/data/CODONS/Ecrisp.cut
-rw-r--r--	2096	root	root	/usr/share/EMBOSS/data/CODONS/Ectr.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Ecyapa.cut
-rw-r--r--	2039	root	root	/usr/share/EMBOSS/data/CODONS/Edayhoff.cut
-rw-r--r--	2126	root	root	/usr/share/EMBOSS/data/CODONS/Eddi.cut
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/CODONS/Eddi_h.cut
-rw-r--r--	2512	root	root	/usr/share/EMBOSS/data/CODONS/Edicdi.cut
-rw-r--r--	2519	root	root	/usr/share/EMBOSS/data/CODONS/Edicdi_high.cut
-rw-r--r--	2109	root	root	/usr/share/EMBOSS/data/CODONS/Edog.cut
-rw-r--r--	2188	root	root	/usr/share/EMBOSS/data/CODONS/Edro.cut
-rw-r--r--	2090	root	root	/usr/share/EMBOSS/data/CODONS/Edro_h.cut
-rw-r--r--	2512	root	root	/usr/share/EMBOSS/data/CODONS/Edrome.cut
-rw-r--r--	2518	root	root	/usr/share/EMBOSS/data/CODONS/Edrome_high.cut
-rw-r--r--	2016	root	root	/usr/share/EMBOSS/data/CODONS/Edrosophila.cut
-rw-r--r--	2098	root	root	/usr/share/EMBOSS/data/CODONS/Eeca.cut
-rw-r--r--	2210	root	root	/usr/share/EMBOSS/data/CODONS/Eeco.cut
-rw-r--r--	2134	root	root	/usr/share/EMBOSS/data/CODONS/Eeco_h.cut
-rw-r--r--	2508	root	root	/usr/share/EMBOSS/data/CODONS/Eecoli.cut
-rw-r--r--	2516	root	root	/usr/share/EMBOSS/data/CODONS/Eecoli_high.cut
-rw-r--r--	2506	root	root	/usr/share/EMBOSS/data/CODONS/Eemeni.cut
-rw-r--r--	2514	root	root	/usr/share/EMBOSS/data/CODONS/Eemeni_high.cut
-rw-r--r--	2520	root	root	/usr/share/EMBOSS/data/CODONS/Eemeni_mit.cut
-rw-r--r--	2534	root	root	/usr/share/EMBOSS/data/CODONS/Eerwct.cut
-rw-r--r--	2017	root	root	/usr/share/EMBOSS/data/CODONS/Ef1.cut
-rw-r--r--	2027	root	root	/usr/share/EMBOSS/data/CODONS/Efish.cut
-rw-r--r--	2060	root	root	/usr/share/EMBOSS/data/CODONS/Efmdvpolyp.cut
-rw-r--r--	2518	root	root	/usr/share/EMBOSS/data/CODONS/Ehaein.cut
-rw-r--r--	2521	root	root	/usr/share/EMBOSS/data/CODONS/Ehalma.cut
-rw-r--r--	2517	root	root	/usr/share/EMBOSS/data/CODONS/Ehalsa.cut
-rw-r--r--	2108	root	root	/usr/share/EMBOSS/data/CODONS/Eham.cut
-rw-r--r--	2086	root	root	/usr/share/EMBOSS/data/CODONS/Ehha.cut
-rw-r--r--	2112	root	root	/usr/share/EMBOSS/data/CODONS/Ehin.cut
-rw-r--r--	2070	root	root	/usr/share/EMBOSS/data/CODONS/Ehma.cut
-rw-r--r--	2517	root	root	/usr/share/EMBOSS/data/CODONS/Ehorvu.cut
-rw-r--r--	2232	root	root	/usr/share/EMBOSS/data/CODONS/Ehum.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Ehuman.cut
-rw-r--r--	2108	root	root	/usr/share/EMBOSS/data/CODONS/Ekla.cut
-rw-r--r--	2509	root	root	/usr/share/EMBOSS/data/CODONS/Eklepn.cut
-rw-r--r--	2520	root	root	/usr/share/EMBOSS/data/CODONS/Eklula.cut
-rw-r--r--	2123	root	root	/usr/share/EMBOSS/data/CODONS/Ekpn.cut
-rw-r--r--	2527	root	root	/usr/share/EMBOSS/data/CODONS/Elacdl.cut
-rw-r--r--	2123	root	root	/usr/share/EMBOSS/data/CODONS/Ella.cut
-rw-r--r--	2520	root	root	/usr/share/EMBOSS/data/CODONS/Elyces.cut
-rw-r--r--	2059	root	root	/usr/share/EMBOSS/data/CODONS/Emac.cut
-rw-r--r--	2507	root	root	/usr/share/EMBOSS/data/CODONS/Emacfa.cut
-rw-r--r--	2496	root	root	/usr/share/EMBOSS/data/CODONS/Emaize.cut
-rw-r--r--	2507	root	root	/usr/share/EMBOSS/data/CODONS/Emaize_chl.cut
-rw-r--r--	2096	root	root	/usr/share/EMBOSS/data/CODONS/Emam_h.cut
-rw-r--r--	2509	root	root	/usr/share/EMBOSS/data/CODONS/Emammal_high.cut
-rw-r--r--	2500	root	root	/usr/share/EMBOSS/data/CODONS/Emanse.cut
-rw-r--r--	2531	root	root	/usr/share/EMBOSS/data/CODONS/Emarpo_chl.cut
-rw-r--r--	2502	root	root	/usr/share/EMBOSS/data/CODONS/Emedsa.cut
-rw-r--r--	2539	root	root	/usr/share/EMBOSS/data/CODONS/Emetth.cut
-rw-r--r--	2048	root	root	/usr/share/EMBOSS/data/CODONS/Emixlg.cut
-rw-r--r--	2501	root	root	/usr/share/EMBOSS/data/CODONS/Emouse.cut
-rw-r--r--	2099	root	root	/usr/share/EMBOSS/data/CODONS/Emsa.cut
-rw-r--r--	2099	root	root	/usr/share/EMBOSS/data/CODONS/Emse.cut
-rw-r--r--	2088	root	root	/usr/share/EMBOSS/data/CODONS/Emta.cut
-rw-r--r--	2091	root	root	/usr/share/EMBOSS/data/CODONS/Emtu.cut
-rw-r--r--	2173	root	root	/usr/share/EMBOSS/data/CODONS/Emus.cut
-rw-r--r--	2217	root	root	/usr/share/EMBOSS/data/CODONS/Emussp.cut
-rw-r--r--	2075	root	root	/usr/share/EMBOSS/data/CODONS/Emva.cut
-rw-r--r--	2520	root	root	/usr/share/EMBOSS/data/CODONS/Emyctu.cut
-rw-r--r--	2109	root	root	/usr/share/EMBOSS/data/CODONS/Emze.cut
-rw-r--r--	2054	root	root	/usr/share/EMBOSS/data/CODONS/Emzecp.cut
-rw-r--r--	2128	root	root	/usr/share/EMBOSS/data/CODONS/Encr.cut
-rw-r--r--	2508	root	root	/usr/share/EMBOSS/data/CODONS/Eneigo.cut
-rw-r--r--	2102	root	root	/usr/share/EMBOSS/data/CODONS/Eneu.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Eneucr.cut
-rw-r--r--	2056	root	root	/usr/share/EMBOSS/data/CODONS/Engo.cut
-rw-r--r--	2522	root	root	/usr/share/EMBOSS/data/CODONS/Eoncmy.cut
-rw-r--r--	2091	root	root	/usr/share/EMBOSS/data/CODONS/Eoncsp.cut
-rw-r--r--	2501	root	root	/usr/share/EMBOSS/data/CODONS/Eorysa.cut
-rw-r--r--	2511	root	root	/usr/share/EMBOSS/data/CODONS/Eorysa_chl.cut
-rw-r--r--	2132	root	root	/usr/share/EMBOSS/data/CODONS/Epae.cut
-rw-r--r--	2500	root	root	/usr/share/EMBOSS/data/CODONS/Epea.cut
-rw-r--r--	2059	root	root	/usr/share/EMBOSS/data/CODONS/Epet.cut
-rw-r--r--	2504	root	root	/usr/share/EMBOSS/data/CODONS/Epethy.cut
-rw-r--r--	2127	root	root	/usr/share/EMBOSS/data/CODONS/Epfa.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Ephavu.cut
-rw-r--r--	2020	root	root	/usr/share/EMBOSS/data/CODONS/Ephix174.cut
-rw-r--r--	2089	root	root	/usr/share/EMBOSS/data/CODONS/Ephv.cut
-rw-r--r--	2101	root	root	/usr/share/EMBOSS/data/CODONS/Ephy.cut
-rw-r--r--	2498	root	root	/usr/share/EMBOSS/data/CODONS/Epig.cut
-rw-r--r--	2513	root	root	/usr/share/EMBOSS/data/CODONS/Eplafa.cut
-rw-r--r--	2032	root	root	/usr/share/EMBOSS/data/CODONS/Epolyomaa2.cut
-rw-r--r--	2010	root	root	/usr/share/EMBOSS/data/CODONS/Epombe.cut
-rw-r--r--	2010	root	root	/usr/share/EMBOSS/data/CODONS/Epombecai.cut
-rw-r--r--	2124	root	root	/usr/share/EMBOSS/data/CODONS/Epot.cut
-rw-r--r--	2124	root	root	/usr/share/EMBOSS/data/CODONS/Eppu.cut
-rw-r--r--	2503	root	root	/usr/share/EMBOSS/data/CODONS/Eprovu.cut
-rw-r--r--	2108	root	root	/usr/share/EMBOSS/data/CODONS/Epse.cut
-rw-r--r--	2515	root	root	/usr/share/EMBOSS/data/CODONS/Epseae.cut
-rw-r--r--	2513	root	root	/usr/share/EMBOSS/data/CODONS/Epsepu.cut
-rw-r--r--	2531	root	root	/usr/share/EMBOSS/data/CODONS/Epsesm.cut
-rw-r--r--	2105	root	root	/usr/share/EMBOSS/data/CODONS/Epsy.cut
-rw-r--r--	2078	root	root	/usr/share/EMBOSS/data/CODONS/Epvu.cut
-rw-r--r--	2127	root	root	/usr/share/EMBOSS/data/CODONS/Erab.cut
-rw-r--r--	2021	root	root	/usr/share/EMBOSS/data/CODONS/Erabbit.cut
-rw-r--r--	2508	root	root	/usr/share/EMBOSS/data/CODONS/Erabit.cut
-rw-r--r--	2164	root	root	/usr/share/EMBOSS/data/CODONS/Erabsp.cut
-rw-r--r--	2506	root	root	/usr/share/EMBOSS/data/CODONS/Erat.cut
-rw-r--r--	2211	root	root	/usr/share/EMBOSS/data/CODONS/Eratsp.cut
-rw-r--r--	2112	root	root	/usr/share/EMBOSS/data/CODONS/Erca.cut
-rw-r--r--	2510	root	root	/usr/share/EMBOSS/data/CODONS/Erhile.cut
-rw-r--r--	2515	root	root	/usr/share/EMBOSS/data/CODONS/Erhime.cut
-rw-r--r--	2068	root	root	/usr/share/EMBOSS/data/CODONS/Erhm.cut
-rw-r--r--	2509	root	root	/usr/share/EMBOSS/data/CODONS/Erhoca.cut
-rw-r--r--	2510	root	root	/usr/share/EMBOSS/data/CODONS/Erhosh.cut
-rw-r--r--	2127	root	root	/usr/share/EMBOSS/data/CODONS/Eric.cut
-rw-r--r--	2106	root	root	/usr/share/EMBOSS/data/CODONS/Erle.cut
-rw-r--r--	2122	root	root	/usr/share/EMBOSS/data/CODONS/Erme.cut
-rw-r--r--	2079	root	root	/usr/share/EMBOSS/data/CODONS/Ersp.cut
-rw-r--r--	2498	root	root	/usr/share/EMBOSS/data/CODONS/Esalsa.cut
-rw-r--r--	2097	root	root	/usr/share/EMBOSS/data/CODONS/Esalsp.cut
-rw-r--r--	2514	root	root	/usr/share/EMBOSS/data/CODONS/Esalty.cut
-rw-r--r--	2120	root	root	/usr/share/EMBOSS/data/CODONS/Esau.cut
-rw-r--r--	2506	root	root	/usr/share/EMBOSS/data/CODONS/Eschma.cut
-rw-r--r--	2513	root	root	/usr/share/EMBOSS/data/CODONS/Eschpo.cut
-rw-r--r--	2543	root	root	/usr/share/EMBOSS/data/CODONS/Eschpo_cai.cut
-rw-r--r--	2520	root	root	/usr/share/EMBOSS/data/CODONS/Eschpo_high.cut
-rw-r--r--	2090	root	root	/usr/share/EMBOSS/data/CODONS/Esco.cut
-rw-r--r--	2506	root	root	/usr/share/EMBOSS/data/CODONS/Eserma.cut
-rw-r--r--	2080	root	root	/usr/share/EMBOSS/data/CODONS/Esgi.cut
-rw-r--r--	2497	root	root	/usr/share/EMBOSS/data/CODONS/Esheep.cut
-rw-r--r--	2075	root	root	/usr/share/EMBOSS/data/CODONS/Eshp.cut
-rw-r--r--	2114	root	root	/usr/share/EMBOSS/data/CODONS/Eshpsp.cut
-rw-r--r--	2081	root	root	/usr/share/EMBOSS/data/CODONS/Esli.cut
-rw-r--r--	2066	root	root	/usr/share/EMBOSS/data/CODONS/Eslm.cut
-rw-r--r--	2096	root	root	/usr/share/EMBOSS/data/CODONS/Esma.cut
-rw-r--r--	2110	root	root	/usr/share/EMBOSS/data/CODONS/Esmi.cut
-rw-r--r--	2102	root	root	/usr/share/EMBOSS/data/CODONS/Esmu.cut
-rw-r--r--	2513	root	root	/usr/share/EMBOSS/data/CODONS/Esoltu.cut
-rw-r--r--	2133	root	root	/usr/share/EMBOSS/data/CODONS/Esoy.cut
-rw-r--r--	2509	root	root	/usr/share/EMBOSS/data/CODONS/Esoybn.cut
-rw-r--r--	2107	root	root	/usr/share/EMBOSS/data/CODONS/Espi.cut
-rw-r--r--	2504	root	root	/usr/share/EMBOSS/data/CODONS/Espiol.cut
-rw-r--r--	2102	root	root	/usr/share/EMBOSS/data/CODONS/Espn.cut
-rw-r--r--	2151	root	root	/usr/share/EMBOSS/data/CODONS/Espo.cut
-rw-r--r--	2074	root	root	/usr/share/EMBOSS/data/CODONS/Espo_h.cut
-rw-r--r--	2111	root	root	/usr/share/EMBOSS/data/CODONS/Espu.cut
-rw-r--r--	2080	root	root	/usr/share/EMBOSS/data/CODONS/Esta.cut
-rw-r--r--	2509	root	root	/usr/share/EMBOSS/data/CODONS/Estaau.cut
-rw-r--r--	2517	root	root	/usr/share/EMBOSS/data/CODONS/Estrco.cut
-rw-r--r--	2514	root	root	/usr/share/EMBOSS/data/CODONS/Estrmu.cut
-rw-r--r--	2515	root	root	/usr/share/EMBOSS/data/CODONS/Estrpn.cut
-rw-r--r--	2516	root	root	/usr/share/EMBOSS/data/CODONS/Estrpu.cut
-rw-r--r--	2155	root	root	/usr/share/EMBOSS/data/CODONS/Esty.cut
-rw-r--r--	2093	root	root	/usr/share/EMBOSS/data/CODONS/Esus.cut
-rw-r--r--	2499	root	root	/usr/share/EMBOSS/data/CODONS/Esv40.cut
-rw-r--r--	2109	root	root	/usr/share/EMBOSS/data/CODONS/Esyhsp.cut
-rw-r--r--	2513	root	root	/usr/share/EMBOSS/data/CODONS/Esynco.cut
-rw-r--r--	2514	root	root	/usr/share/EMBOSS/data/CODONS/Esyncy.cut
-rw-r--r--	2135	root	root	/usr/share/EMBOSS/data/CODONS/Esynsp.cut
-rw-r--r--	2141	root	root	/usr/share/EMBOSS/data/CODONS/Etbr.cut
-rw-r--r--	2114	root	root	/usr/share/EMBOSS/data/CODONS/Etcr.cut
-rw-r--r--	2079	root	root	/usr/share/EMBOSS/data/CODONS/Eter.cut
-rw-r--r--	2073	root	root	/usr/share/EMBOSS/data/CODONS/Etetsp.cut
-rw-r--r--	2511	root	root	/usr/share/EMBOSS/data/CODONS/Etetth.cut
-rw-r--r--	2512	root	root	/usr/share/EMBOSS/data/CODONS/Etheth.cut
-rw-r--r--	2131	root	root	/usr/share/EMBOSS/data/CODONS/Etob.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Etobac.cut
-rw-r--r--	2516	root	root	/usr/share/EMBOSS/data/CODONS/Etobac_chl.cut
-rw-r--r--	2049	root	root	/usr/share/EMBOSS/data/CODONS/Etobcp.cut
-rw-r--r--	2130	root	root	/usr/share/EMBOSS/data/CODONS/Etom.cut
-rw-r--r--	2107	root	root	/usr/share/EMBOSS/data/CODONS/Etrb.cut
-rw-r--r--	2506	root	root	/usr/share/EMBOSS/data/CODONS/Etrybr.cut
-rw-r--r--	2504	root	root	/usr/share/EMBOSS/data/CODONS/Etrycr.cut
-rw-r--r--	2110	root	root	/usr/share/EMBOSS/data/CODONS/Evco.cut
-rw-r--r--	2531	root	root	/usr/share/EMBOSS/data/CODONS/Evibch.cut
-rw-r--r--	2505	root	root	/usr/share/EMBOSS/data/CODONS/Ewheat.cut
-rw-r--r--	2114	root	root	/usr/share/EMBOSS/data/CODONS/Ewht.cut
-rw-r--r--	2168	root	root	/usr/share/EMBOSS/data/CODONS/Exel.cut
-rw-r--r--	2503	root	root	/usr/share/EMBOSS/data/CODONS/Exenla.cut
-rw-r--r--	2027	root	root	/usr/share/EMBOSS/data/CODONS/Exenopus.cut
-rw-r--r--	2513	root	root	/usr/share/EMBOSS/data/CODONS/Eyeast.cut
-rw-r--r--	2519	root	root	/usr/share/EMBOSS/data/CODONS/Eyeast_cai.cut
-rw-r--r--	2543	root	root	/usr/share/EMBOSS/data/CODONS/Eyeast_high.cut
-rw-r--r--	2525	root	root	/usr/share/EMBOSS/data/CODONS/Eyeast_mit.cut
-rw-r--r--	2044	root	root	/usr/share/EMBOSS/data/CODONS/Eyeastcai.cut
-rw-r--r--	2105	root	root	/usr/share/EMBOSS/data/CODONS/Eyen.cut
-rw-r--r--	2510	root	root	/usr/share/EMBOSS/data/CODONS/Eyeren.cut
-rw-r--r--	2502	root	root	/usr/share/EMBOSS/data/CODONS/Eyerpe.cut
-rw-r--r--	2218	root	root	/usr/share/EMBOSS/data/CODONS/Eysc.cut
-rw-r--r--	2120	root	root	/usr/share/EMBOSS/data/CODONS/Eysc_h.cut
-rw-r--r--	2061	root	root	/usr/share/EMBOSS/data/CODONS/Eyscmt.cut
-rw-r--r--	2103	root	root	/usr/share/EMBOSS/data/CODONS/Eysp.cut
-rw-r--r--	2091	root	root	/usr/share/EMBOSS/data/CODONS/Ezebrafish.cut
-rw-r--r--	2139	root	root	/usr/share/EMBOSS/data/CODONS/Ezma.cut
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/JASPAR_CNE/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/JASPAR_CORE/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/JASPAR_FAM/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/JASPAR_PHYLOFACTS/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/JASPAR_POLII/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/JASPAR_SPLICE/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/PRINTS/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/PROSITE/dummyfile
-rw-r--r--	59	root	root	/usr/share/EMBOSS/data/REBASE/dummyfile
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/doc/manuals
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/doc/programs
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/doc/tutorials
-rw-r--r--	14839	root	root	/usr/share/EMBOSS/doc/manuals/EMBOSS-FreeBSD-HOWTO.txt
-rw-r--r--	7403	root	root	/usr/share/EMBOSS/doc/manuals/admin.aux
-rw-r--r--	144504	root	root	/usr/share/EMBOSS/doc/manuals/admin.dvi
-rw-r--r--	5124	root	root	/usr/share/EMBOSS/doc/manuals/admin.log
-rw-r--r--	305395	root	root	/usr/share/EMBOSS/doc/manuals/admin.pdf
-rw-r--r--	455499	root	root	/usr/share/EMBOSS/doc/manuals/admin.ps
-rw-r--r--	100383	root	root	/usr/share/EMBOSS/doc/manuals/admin.tex
-rw-r--r--	5342	root	root	/usr/share/EMBOSS/doc/manuals/admin.toc
-rw-r--r--	567627	root	root	/usr/share/EMBOSS/doc/manuals/adminguide.tar.gz
-rw-r--r--	65024	root	root	/usr/share/EMBOSS/doc/manuals/domainatrix.doc
-rw-r--r--	787	root	root	/usr/share/EMBOSS/doc/manuals/emboss.sty
-rw-r--r--	18061	root	root	/usr/share/EMBOSS/doc/manuals/emboss_qg.pdf
-rw-r--r--	183138	root	root	/usr/share/EMBOSS/doc/manuals/emboss_qg.ps
-rw-r--r--	18111	root	root	/usr/share/EMBOSS/doc/manuals/fdl.txt
-rw-r--r--	48003	root	root	/usr/share/EMBOSS/doc/manuals/program.ps.gz
drwxr-xr-x	12288	root	root	/usr/share/EMBOSS/doc/programs/html
drwxr-xr-x	12288	root	root	/usr/share/EMBOSS/doc/programs/text
-rw-r--r--	15403	root	root	/usr/share/EMBOSS/doc/programs/html/aaindexextract.html
-rw-r--r--	558867	root	root	/usr/share/EMBOSS/doc/programs/html/abiview.1.abiview.gif
-rw-r--r--	12568	root	root	/usr/share/EMBOSS/doc/programs/html/abiview.html
-rw-r--r--	1177	root	root	/usr/share/EMBOSS/doc/programs/html/acd_group.html
-rw-r--r--	6052	root	root	/usr/share/EMBOSS/doc/programs/html/acdc.html
-rw-r--r--	289	root	root	/usr/share/EMBOSS/doc/programs/html/acdlog.html
-rw-r--r--	5541	root	root	/usr/share/EMBOSS/doc/programs/html/acdpretty.html
-rw-r--r--	5538	root	root	/usr/share/EMBOSS/doc/programs/html/acdtable.html
-rw-r--r--	6231	root	root	/usr/share/EMBOSS/doc/programs/html/acdtrace.html
-rw-r--r--	6189	root	root	/usr/share/EMBOSS/doc/programs/html/acdvalid.html
-rw-r--r--	4644	root	root	/usr/share/EMBOSS/doc/programs/html/ajtest.html
-rw-r--r--	21013	root	root	/usr/share/EMBOSS/doc/programs/html/aligncopy.html
-rw-r--r--	21892	root	root	/usr/share/EMBOSS/doc/programs/html/aligncopypair.html
-rw-r--r--	1107	root	root	/usr/share/EMBOSS/doc/programs/html/alignment_consensus_group.html
-rw-r--r--	766	root	root	/usr/share/EMBOSS/doc/programs/html/alignment_differences_group.html
-rw-r--r--	1117	root	root	/usr/share/EMBOSS/doc/programs/html/alignment_dot_plots_group.html
-rw-r--r--	1110	root	root	/usr/share/EMBOSS/doc/programs/html/alignment_global_group.html
-rw-r--r--	1382	root	root	/usr/share/EMBOSS/doc/programs/html/alignment_local_group.html
-rw-r--r--	1578	root	root	/usr/share/EMBOSS/doc/programs/html/alignment_multiple_group.html
-rw-r--r--	24791	root	root	/usr/share/EMBOSS/doc/programs/html/antigenic.html
-rw-r--r--	864	root	root	/usr/share/EMBOSS/doc/programs/html/assembly_fragment_assembly_group.html
-rw-r--r--	20495	root	root	/usr/share/EMBOSS/doc/programs/html/backtranambig.html
-rw-r--r--	26401	root	root	/usr/share/EMBOSS/doc/programs/html/backtranseq.html
-rw-r--r--	81327	root	root	/usr/share/EMBOSS/doc/programs/html/banana.1.banana.gif
-rw-r--r--	83799	root	root	/usr/share/EMBOSS/doc/programs/html/banana.html
-rw-r--r--	23049	root	root	/usr/share/EMBOSS/doc/programs/html/biosed.html
-rw-r--r--	16241	root	root	/usr/share/EMBOSS/doc/programs/html/btwisted.html
-rw-r--r--	14006	root	root	/usr/share/EMBOSS/doc/programs/html/cai.html
-rw-r--r--	6909	root	root	/usr/share/EMBOSS/doc/programs/html/chaos.1.chaos.gif
-rw-r--r--	15250	root	root	/usr/share/EMBOSS/doc/programs/html/chaos.html
-rw-r--r--	17422	root	root	/usr/share/EMBOSS/doc/programs/html/charge.html
-rw-r--r--	14527	root	root	/usr/share/EMBOSS/doc/programs/html/checktrans.html
-rw-r--r--	14694	root	root	/usr/share/EMBOSS/doc/programs/html/chips.html
-rw-r--r--	11315	root	root	/usr/share/EMBOSS/doc/programs/html/cirdna.1.cirdna.gif
-rw-r--r--	18125	root	root	/usr/share/EMBOSS/doc/programs/html/cirdna.html
-rw-r--r--	11977	root	root	/usr/share/EMBOSS/doc/programs/html/codcmp.html
-rw-r--r--	14342	root	root	/usr/share/EMBOSS/doc/programs/html/codcopy.html
-rw-r--r--	24476	root	root	/usr/share/EMBOSS/doc/programs/html/coderet.html
-rw-r--r--	20199	root	root	/usr/share/EMBOSS/doc/programs/html/complex.html
-rw-r--r--	37272	root	root	/usr/share/EMBOSS/doc/programs/html/compseq.html
-rw-r--r--	14359	root	root	/usr/share/EMBOSS/doc/programs/html/cons.html
-rw-r--r--	11485	root	root	/usr/share/EMBOSS/doc/programs/html/consambig.html
-rw-r--r--	16496	root	root	/usr/share/EMBOSS/doc/programs/html/cpgplot.1.cpgplot.gif
-rw-r--r--	22654	root	root	/usr/share/EMBOSS/doc/programs/html/cpgplot.html
-rw-r--r--	19051	root	root	/usr/share/EMBOSS/doc/programs/html/cpgreport.html
-rw-r--r--	16455	root	root	/usr/share/EMBOSS/doc/programs/html/cusp.html
-rw-r--r--	9456	root	root	/usr/share/EMBOSS/doc/programs/html/cutgextract.html
-rw-r--r--	23871	root	root	/usr/share/EMBOSS/doc/programs/html/cutseq.html
-rw-r--r--	30601	root	root	/usr/share/EMBOSS/doc/programs/html/dan.2.dan.gif
-rw-r--r--	33762	root	root	/usr/share/EMBOSS/doc/programs/html/dan.html
-rw-r--r--	14665	root	root	/usr/share/EMBOSS/doc/programs/html/dbiblast.html
-rw-r--r--	13135	root	root	/usr/share/EMBOSS/doc/programs/html/dbifasta.html
-rw-r--r--	13574	root	root	/usr/share/EMBOSS/doc/programs/html/dbiflat.html
-rw-r--r--	14188	root	root	/usr/share/EMBOSS/doc/programs/html/dbigcg.html
-rw-r--r--	14005	root	root	/usr/share/EMBOSS/doc/programs/html/dbxfasta.html
-rw-r--r--	13967	root	root	/usr/share/EMBOSS/doc/programs/html/dbxflat.html
-rw-r--r--	14681	root	root	/usr/share/EMBOSS/doc/programs/html/dbxgcg.html
-rw-r--r--	12968	root	root	/usr/share/EMBOSS/doc/programs/html/degapseq.html
-rw-r--r--	23397	root	root	/usr/share/EMBOSS/doc/programs/html/density.html
-rw-r--r--	14717	root	root	/usr/share/EMBOSS/doc/programs/html/descseq.html
-rw-r--r--	25682	root	root	/usr/share/EMBOSS/doc/programs/html/diffseq.html
-rw-r--r--	22665	root	root	/usr/share/EMBOSS/doc/programs/html/digest.html
-rw-r--r--	2507	root	root	/usr/share/EMBOSS/doc/programs/html/display_group.html
-rw-r--r--	22736	root	root	/usr/share/EMBOSS/doc/programs/html/distmat.html
-rw-r--r--	4265	root	root	/usr/share/EMBOSS/doc/programs/html/dotmatcher.1.dotmatcher.gif
-rw-r--r--	23249	root	root	/usr/share/EMBOSS/doc/programs/html/dotmatcher.html
-rw-r--r--	10351	root	root	/usr/share/EMBOSS/doc/programs/html/dotpath.1.dotpath.gif
-rw-r--r--	22661	root	root	/usr/share/EMBOSS/doc/programs/html/dotpath.html
-rw-r--r--	9064	root	root	/usr/share/EMBOSS/doc/programs/html/dottup.1.dottup.gif
-rw-r--r--	20246	root	root	/usr/share/EMBOSS/doc/programs/html/dottup.html
-rw-r--r--	43797	root	root	/usr/share/EMBOSS/doc/programs/html/dreg.html
-rw-r--r--	28184	root	root	/usr/share/EMBOSS/doc/programs/html/edialign.html
-rw-r--r--	5674	root	root	/usr/share/EMBOSS/doc/programs/html/edit_group.html
-rw-r--r--	21109	root	root	/usr/share/EMBOSS/doc/programs/html/einverted.html
-rw-r--r--	1400	root	root	/usr/share/EMBOSS/doc/programs/html/emboss_icon.gif
-rw-r--r--	9559	root	root	/usr/share/EMBOSS/doc/programs/html/emboss_icon.jpg
-rw-r--r--	32085	root	root	/usr/share/EMBOSS/doc/programs/html/embossdata.html
-rw-r--r--	5435	root	root	/usr/share/EMBOSS/doc/programs/html/embossversion.html
-rw-r--r--	73237	root	root	/usr/share/EMBOSS/doc/programs/html/emma.html
-rw-r--r--	40629	root	root	/usr/share/EMBOSS/doc/programs/html/emowse.html
-rw-r--r--	18842	root	root	/usr/share/EMBOSS/doc/programs/html/entret.html
-rw-r--r--	736	root	root	/usr/share/EMBOSS/doc/programs/html/enzyme_kinetics_group.html
-rw-r--r--	7796	root	root	/usr/share/EMBOSS/doc/programs/html/epestfind.1.epestfind.gif
-rw-r--r--	27551	root	root	/usr/share/EMBOSS/doc/programs/html/epestfind.html
-rw-r--r--	80553	root	root	/usr/share/EMBOSS/doc/programs/html/eprimer3.html
-rw-r--r--	14718	root	root	/usr/share/EMBOSS/doc/programs/html/equicktandem.html
-rw-r--r--	37224	root	root	/usr/share/EMBOSS/doc/programs/html/est2genome.html
-rw-r--r--	16046	root	root	/usr/share/EMBOSS/doc/programs/html/etandem.html
-rw-r--r--	15431	root	root	/usr/share/EMBOSS/doc/programs/html/extractalign.html
-rw-r--r--	53002	root	root	/usr/share/EMBOSS/doc/programs/html/extractfeat.html
-rw-r--r--	26649	root	root	/usr/share/EMBOSS/doc/programs/html/extractseq.html
-rw-r--r--	16516	root	root	/usr/share/EMBOSS/doc/programs/html/featcopy.html
-rw-r--r--	20449	root	root	/usr/share/EMBOSS/doc/programs/html/featreport.html
-rw-r--r--	1223	root	root	/usr/share/EMBOSS/doc/programs/html/feature_tables_group.html
-rw-r--r--	10218	root	root	/usr/share/EMBOSS/doc/programs/html/findkm.1.findkm.gif
-rw-r--r--	7496	root	root	/usr/share/EMBOSS/doc/programs/html/findkm.html
-rw-r--r--	15932	root	root	/usr/share/EMBOSS/doc/programs/html/freak.html
-rw-r--r--	25917	root	root	/usr/share/EMBOSS/doc/programs/html/fuzznuc.html
-rw-r--r--	17803	root	root	/usr/share/EMBOSS/doc/programs/html/fuzzpro.html
-rw-r--r--	29947	root	root	/usr/share/EMBOSS/doc/programs/html/fuzztran.html
-rw-r--r--	21340	root	root	/usr/share/EMBOSS/doc/programs/html/garnier.html
-rw-r--r--	10311	root	root	/usr/share/EMBOSS/doc/programs/html/geecee.html
-rw-r--r--	27134	root	root	/usr/share/EMBOSS/doc/programs/html/getorf.html
-rw-r--r--	6236	root	root	/usr/share/EMBOSS/doc/programs/html/groups.html
-rw-r--r--	20233	root	root	/usr/share/EMBOSS/doc/programs/html/helixturnhelix.html
-rw-r--r--	2982	root	root	/usr/share/EMBOSS/doc/programs/html/hmm_group.html
-rw-r--r--	17416	root	root	/usr/share/EMBOSS/doc/programs/html/hmoment.html
-rw-r--r--	23258	root	root	/usr/share/EMBOSS/doc/programs/html/iep.html
-rw-r--r--	23552	root	root	/usr/share/EMBOSS/doc/programs/html/index.html
-rw-r--r--	41674	root	root	/usr/share/EMBOSS/doc/programs/html/infoalign.html
-rw-r--r--	9305	root	root	/usr/share/EMBOSS/doc/programs/html/infobase.html
-rw-r--r--	11396	root	root	/usr/share/EMBOSS/doc/programs/html/inforesidue.html
-rw-r--r--	1829	root	root	/usr/share/EMBOSS/doc/programs/html/information_group.html
-rw-r--r--	21682	root	root	/usr/share/EMBOSS/doc/programs/html/infoseq.html
-rw-r--r--	33501	root	root	/usr/share/EMBOSS/doc/programs/html/isochore.1.isochore.gif
-rw-r--r--	16467	root	root	/usr/share/EMBOSS/doc/programs/html/isochore.html
-rw-r--r--	13786	root	root	/usr/share/EMBOSS/doc/programs/html/jaspextract.html
-rw-r--r--	25049	root	root	/usr/share/EMBOSS/doc/programs/html/jaspscan.html
-rw-r--r--	7285	root	root	/usr/share/EMBOSS/doc/programs/html/jembossctl.html
-rw-r--r--	34590	root	root	/usr/share/EMBOSS/doc/programs/html/libscan.html
-rw-r--r--	3056	root	root	/usr/share/EMBOSS/doc/programs/html/lindna.1.lindna.gif
-rw-r--r--	17861	root	root	/usr/share/EMBOSS/doc/programs/html/lindna.html
-rw-r--r--	18523	root	root	/usr/share/EMBOSS/doc/programs/html/listor.html
-rw-r--r--	23517	root	root	/usr/share/EMBOSS/doc/programs/html/makenucseq.html
-rw-r--r--	24902	root	root	/usr/share/EMBOSS/doc/programs/html/makeprotseq.html
-rw-r--r--	21127	root	root	/usr/share/EMBOSS/doc/programs/html/marscan.html
-rw-r--r--	13595	root	root	/usr/share/EMBOSS/doc/programs/html/maskambignuc.html
-rw-r--r--	13638	root	root	/usr/share/EMBOSS/doc/programs/html/maskambigprot.html
-rw-r--r--	28719	root	root	/usr/share/EMBOSS/doc/programs/html/maskfeat.html
-rw-r--r--	19034	root	root	/usr/share/EMBOSS/doc/programs/html/maskseq.html
-rw-r--r--	31367	root	root	/usr/share/EMBOSS/doc/programs/html/matcher.html
-rw-r--r--	28798	root	root	/usr/share/EMBOSS/doc/programs/html/megamerger.html
-rw-r--r--	722	root	root	/usr/share/EMBOSS/doc/programs/html/menus_group.html
-rw-r--r--	31678	root	root	/usr/share/EMBOSS/doc/programs/html/merger.html
-rw-r--r--	28447	root	root	/usr/share/EMBOSS/doc/programs/html/msbar.html
-rw-r--r--	9051	root	root	/usr/share/EMBOSS/doc/programs/html/mwcontam.html
-rw-r--r--	9692	root	root	/usr/share/EMBOSS/doc/programs/html/mwfilter.html
-rw-r--r--	29677	root	root	/usr/share/EMBOSS/doc/programs/html/needle.html
-rw-r--r--	16945	root	root	/usr/share/EMBOSS/doc/programs/html/newcpgreport.html
-rw-r--r--	14699	root	root	/usr/share/EMBOSS/doc/programs/html/newcpgseek.html
-rw-r--r--	13841	root	root	/usr/share/EMBOSS/doc/programs/html/newseq.html
-rw-r--r--	12115	root	root	/usr/share/EMBOSS/doc/programs/html/nohtml.html
-rw-r--r--	11590	root	root	/usr/share/EMBOSS/doc/programs/html/noreturn.html
-rw-r--r--	16427	root	root	/usr/share/EMBOSS/doc/programs/html/nospace.html
-rw-r--r--	12101	root	root	/usr/share/EMBOSS/doc/programs/html/notab.html
-rw-r--r--	20754	root	root	/usr/share/EMBOSS/doc/programs/html/notseq.html
-rw-r--r--	15403	root	root	/usr/share/EMBOSS/doc/programs/html/nthseq.html
-rw-r--r--	17400	root	root	/usr/share/EMBOSS/doc/programs/html/nthseqset.html
-rw-r--r--	2663	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_2d_structure_group.html
-rw-r--r--	1158	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_codon_usage_group.html
-rw-r--r--	741	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_codon_usage_nucleic_gene_finding_group.html
-rw-r--r--	1737	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_composition_group.html
-rw-r--r--	1280	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_cpg_islands_group.html
-rw-r--r--	1667	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_gene_finding_group.html
-rw-r--r--	1111	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_motifs_group.html
-rw-r--r--	840	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_mutation_group.html
-rw-r--r--	991	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_primers_group.html
-rw-r--r--	1032	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_profiles_group.html
-rw-r--r--	1107	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_repeats_group.html
-rw-r--r--	1556	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_restriction_group.html
-rw-r--r--	2544	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_rna_folding_group.html
-rw-r--r--	908	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_transcription_group.html
-rw-r--r--	1917	root	root	/usr/share/EMBOSS/doc/programs/html/nucleic_translation_group.html
-rw-r--r--	12941	root	root	/usr/share/EMBOSS/doc/programs/html/octanol.1.octanol.gif
-rw-r--r--	19028	root	root	/usr/share/EMBOSS/doc/programs/html/octanol.html
-rw-r--r--	13503	root	root	/usr/share/EMBOSS/doc/programs/html/oddcomp.html
-rw-r--r--	17021	root	root	/usr/share/EMBOSS/doc/programs/html/palindrome.html
-rw-r--r--	21825	root	root	/usr/share/EMBOSS/doc/programs/html/pasteseq.html
-rw-r--r--	14791	root	root	/usr/share/EMBOSS/doc/programs/html/patmatdb.html
-rw-r--r--	23233	root	root	/usr/share/EMBOSS/doc/programs/html/patmatmotifs.html
-rw-r--r--	17441	root	root	/usr/share/EMBOSS/doc/programs/html/pepcoil.html
-rw-r--r--	62285	root	root	/usr/share/EMBOSS/doc/programs/html/pepinfo.1.pepinfo.gif
-rw-r--r--	22400	root	root	/usr/share/EMBOSS/doc/programs/html/pepinfo.html
-rw-r--r--	5817	root	root	/usr/share/EMBOSS/doc/programs/html/pepnet.1.pepnet.gif
-rw-r--r--	17076	root	root	/usr/share/EMBOSS/doc/programs/html/pepnet.html
-rw-r--r--	17325	root	root	/usr/share/EMBOSS/doc/programs/html/pepstats.html
-rw-r--r--	7079	root	root	/usr/share/EMBOSS/doc/programs/html/pepwheel.1.pepwheel.gif
-rw-r--r--	18694	root	root	/usr/share/EMBOSS/doc/programs/html/pepwheel.html
-rw-r--r--	14929	root	root	/usr/share/EMBOSS/doc/programs/html/pepwindow.1.pepwindow.gif
-rw-r--r--	18161	root	root	/usr/share/EMBOSS/doc/programs/html/pepwindow.html
-rw-r--r--	16346	root	root	/usr/share/EMBOSS/doc/programs/html/pepwindowall.1.pepwindowall.gif
-rw-r--r--	14350	root	root	/usr/share/EMBOSS/doc/programs/html/pepwindowall.html
-rw-r--r--	1150	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_consensus_group.html
-rw-r--r--	1035	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_continuous_characters_group.html
-rw-r--r--	2322	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_discrete_characters_group.html
-rw-r--r--	1482	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_distance_matrix_group.html
-rw-r--r--	1053	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_gene_frequencies_group.html
-rw-r--r--	720	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_group.html
-rw-r--r--	4699	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_molecular_sequence_group.html
-rw-r--r--	1040	root	root	/usr/share/EMBOSS/doc/programs/html/phylogeny_tree_drawing_group.html
-rw-r--r--	16576	root	root	/usr/share/EMBOSS/doc/programs/html/plotcon.1.plotcon.gif
-rw-r--r--	13480	root	root	/usr/share/EMBOSS/doc/programs/html/plotcon.html
-rw-r--r--	10849	root	root	/usr/share/EMBOSS/doc/programs/html/plotorf.1.plotorf.gif
-rw-r--r--	49341	root	root	/usr/share/EMBOSS/doc/programs/html/plotorf.2.plotorf.gif
-rw-r--r--	24135	root	root	/usr/share/EMBOSS/doc/programs/html/plotorf.html
-rw-r--r--	15980	root	root	/usr/share/EMBOSS/doc/programs/html/polydot.1.polydot.gif
-rw-r--r--	11286	root	root	/usr/share/EMBOSS/doc/programs/html/polydot.html
-rw-r--r--	40004	root	root	/usr/share/EMBOSS/doc/programs/html/preg.html
-rw-r--r--	50096	root	root	/usr/share/EMBOSS/doc/programs/html/prettyplot.1.prettyplot.gif
-rw-r--r--	51172	root	root	/usr/share/EMBOSS/doc/programs/html/prettyplot.2.prettyplot.gif
-rw-r--r--	24296	root	root	/usr/share/EMBOSS/doc/programs/html/prettyplot.html
-rw-r--r--	25540	root	root	/usr/share/EMBOSS/doc/programs/html/prettyseq.html
-rw-r--r--	13562	root	root	/usr/share/EMBOSS/doc/programs/html/primersearch.html
-rw-r--r--	14492	root	root	/usr/share/EMBOSS/doc/programs/html/printsextract.html
-rw-r--r--	11297	root	root	/usr/share/EMBOSS/doc/programs/html/profit.html
-rw-r--r--	36757	root	root	/usr/share/EMBOSS/doc/programs/html/prophecy.html
-rw-r--r--	25904	root	root	/usr/share/EMBOSS/doc/programs/html/prophet.html
-rw-r--r--	6670	root	root	/usr/share/EMBOSS/doc/programs/html/prosextract.html
-rw-r--r--	1610	root	root	/usr/share/EMBOSS/doc/programs/html/protein_2d_structure_group.html
-rw-r--r--	3286	root	root	/usr/share/EMBOSS/doc/programs/html/protein_3d_structure_group.html
-rw-r--r--	2563	root	root	/usr/share/EMBOSS/doc/programs/html/protein_composition_group.html
-rw-r--r--	3990	root	root	/usr/share/EMBOSS/doc/programs/html/protein_motifs_group.html
-rw-r--r--	835	root	root	/usr/share/EMBOSS/doc/programs/html/protein_mutation_group.html
-rw-r--r--	1027	root	root	/usr/share/EMBOSS/doc/programs/html/protein_profiles_group.html
-rw-r--r--	765	root	root	/usr/share/EMBOSS/doc/programs/html/protein_sequence_alignment_group.html
-rw-r--r--	19918	root	root	/usr/share/EMBOSS/doc/programs/html/pscan.html
-rw-r--r--	31978	root	root	/usr/share/EMBOSS/doc/programs/html/psiphi.html
-rw-r--r--	22889	root	root	/usr/share/EMBOSS/doc/programs/html/rebaseextract.html
-rw-r--r--	18887	root	root	/usr/share/EMBOSS/doc/programs/html/recoder.html
-rw-r--r--	12925	root	root	/usr/share/EMBOSS/doc/programs/html/redata.html
-rw-r--r--	56959	root	root	/usr/share/EMBOSS/doc/programs/html/remap.html
-rw-r--r--	19639	root	root	/usr/share/EMBOSS/doc/programs/html/restover.html
-rw-r--r--	42615	root	root	/usr/share/EMBOSS/doc/programs/html/restrict.html
-rw-r--r--	18227	root	root	/usr/share/EMBOSS/doc/programs/html/revseq.html
-rw-r--r--	17130	root	root	/usr/share/EMBOSS/doc/programs/html/seealso.html
-rw-r--r--	10553	root	root	/usr/share/EMBOSS/doc/programs/html/seqmatchall.html
-rw-r--r--	58708	root	root	/usr/share/EMBOSS/doc/programs/html/seqret.html
-rw-r--r--	17684	root	root	/usr/share/EMBOSS/doc/programs/html/seqretsetall.html
-rw-r--r--	16985	root	root	/usr/share/EMBOSS/doc/programs/html/seqretsplit.html
-rw-r--r--	60704	root	root	/usr/share/EMBOSS/doc/programs/html/showalign.html
-rw-r--r--	41948	root	root	/usr/share/EMBOSS/doc/programs/html/showdb.html
-rw-r--r--	38898	root	root	/usr/share/EMBOSS/doc/programs/html/showfeat.html
-rw-r--r--	23353	root	root	/usr/share/EMBOSS/doc/programs/html/showorf.html
-rw-r--r--	52044	root	root	/usr/share/EMBOSS/doc/programs/html/showpep.html
-rw-r--r--	76274	root	root	/usr/share/EMBOSS/doc/programs/html/showseq.html
-rw-r--r--	10039	root	root	/usr/share/EMBOSS/doc/programs/html/shuffleseq.html
-rw-r--r--	22532	root	root	/usr/share/EMBOSS/doc/programs/html/sigcleave.html
-rw-r--r--	15771	root	root	/usr/share/EMBOSS/doc/programs/html/silent.html
-rw-r--r--	48738	root	root	/usr/share/EMBOSS/doc/programs/html/sirna.html
-rw-r--r--	40267	root	root	/usr/share/EMBOSS/doc/programs/html/sixpack.html
-rw-r--r--	17529	root	root	/usr/share/EMBOSS/doc/programs/html/sizeseq.html
-rw-r--r--	28914	root	root	/usr/share/EMBOSS/doc/programs/html/skipredundant.html
-rw-r--r--	26598	root	root	/usr/share/EMBOSS/doc/programs/html/skipseq.html
-rw-r--r--	19803	root	root	/usr/share/EMBOSS/doc/programs/html/splitsource.html
-rw-r--r--	32081	root	root	/usr/share/EMBOSS/doc/programs/html/splitter.html
-rw-r--r--	24884	root	root	/usr/share/EMBOSS/doc/programs/html/stretcher.html
-rw-r--r--	8619	root	root	/usr/share/EMBOSS/doc/programs/html/stssearch.html
-rw-r--r--	26084	root	root	/usr/share/EMBOSS/doc/programs/html/supermatcher.html
-rw-r--r--	19771	root	root	/usr/share/EMBOSS/doc/programs/html/syco.1.syco.gif
-rw-r--r--	16156	root	root	/usr/share/EMBOSS/doc/programs/html/syco.html
-rw-r--r--	19314	root	root	/usr/share/EMBOSS/doc/programs/html/tcode.2.tcode.gif
-rw-r--r--	28453	root	root	/usr/share/EMBOSS/doc/programs/html/tcode.html
-rw-r--r--	1463	root	root	/usr/share/EMBOSS/doc/programs/html/template.html
-rw-r--r--	778	root	root	/usr/share/EMBOSS/doc/programs/html/test_group.html
-rw-r--r--	14465	root	root	/usr/share/EMBOSS/doc/programs/html/textsearch.html
-rw-r--r--	13649	root	root	/usr/share/EMBOSS/doc/programs/html/tfextract.html
-rw-r--r--	69996	root	root	/usr/share/EMBOSS/doc/programs/html/tfm.html
-rw-r--r--	17814	root	root	/usr/share/EMBOSS/doc/programs/html/tfscan.html
-rw-r--r--	19227	root	root	/usr/share/EMBOSS/doc/programs/html/tmap.1.tmap.gif
-rw-r--r--	14372	root	root	/usr/share/EMBOSS/doc/programs/html/tmap.html
-rw-r--r--	20367	root	root	/usr/share/EMBOSS/doc/programs/html/tranalign.html
-rw-r--r--	57038	root	root	/usr/share/EMBOSS/doc/programs/html/transeq.html
-rw-r--r--	22908	root	root	/usr/share/EMBOSS/doc/programs/html/trimest.html
-rw-r--r--	20653	root	root	/usr/share/EMBOSS/doc/programs/html/trimseq.html
-rw-r--r--	16709	root	root	/usr/share/EMBOSS/doc/programs/html/trimspace.html
-rw-r--r--	40765	root	root	/usr/share/EMBOSS/doc/programs/html/twofeat.html
-rw-r--r--	13881	root	root	/usr/share/EMBOSS/doc/programs/html/union.html
-rw-r--r--	3459	root	root	/usr/share/EMBOSS/doc/programs/html/utils_database_creation_group.html
-rw-r--r--	1357	root	root	/usr/share/EMBOSS/doc/programs/html/utils_database_indexing_group.html
-rw-r--r--	841	root	root	/usr/share/EMBOSS/doc/programs/html/utils_misc_group.html
-rw-r--r--	20429	root	root	/usr/share/EMBOSS/doc/programs/html/vectorstrip.html
-rw-r--r--	30491	root	root	/usr/share/EMBOSS/doc/programs/html/water.html
-rw-r--r--	12390	root	root	/usr/share/EMBOSS/doc/programs/html/whichdb.html
-rw-r--r--	16972	root	root	/usr/share/EMBOSS/doc/programs/html/wobble.1.wobble.gif
-rw-r--r--	14673	root	root	/usr/share/EMBOSS/doc/programs/html/wobble.html
-rw-r--r--	13843	root	root	/usr/share/EMBOSS/doc/programs/html/wordcount.html
-rw-r--r--	26259	root	root	/usr/share/EMBOSS/doc/programs/html/wordfinder.html
-rw-r--r--	23086	root	root	/usr/share/EMBOSS/doc/programs/html/wordmatch.html
-rw-r--r--	67991	root	root	/usr/share/EMBOSS/doc/programs/html/wossname.html
-rw-r--r--	18566	root	root	/usr/share/EMBOSS/doc/programs/html/yank.html
-rw-r--r--	6	root	root	/usr/share/EMBOSS/doc/programs/text/SITE-DIRECTED.txt
-rw-r--r--	12767	root	root	/usr/share/EMBOSS/doc/programs/text/aaindexextract.txt
-rw-r--r--	8462	root	root	/usr/share/EMBOSS/doc/programs/text/abiview.txt
-rw-r--r--	4718	root	root	/usr/share/EMBOSS/doc/programs/text/acdc.txt
-rw-r--r--	248	root	root	/usr/share/EMBOSS/doc/programs/text/acdlog.txt
-rw-r--r--	4285	root	root	/usr/share/EMBOSS/doc/programs/text/acdpretty.txt
-rw-r--r--	3966	root	root	/usr/share/EMBOSS/doc/programs/text/acdtable.txt
-rw-r--r--	4901	root	root	/usr/share/EMBOSS/doc/programs/text/acdtrace.txt
-rw-r--r--	5023	root	root	/usr/share/EMBOSS/doc/programs/text/acdvalid.txt
-rw-r--r--	14454	root	root	/usr/share/EMBOSS/doc/programs/text/aligncopy.txt
-rw-r--r--	14893	root	root	/usr/share/EMBOSS/doc/programs/text/aligncopypair.txt
-rw-r--r--	21597	root	root	/usr/share/EMBOSS/doc/programs/text/antigenic.txt
-rw-r--r--	15734	root	root	/usr/share/EMBOSS/doc/programs/text/backtranambig.txt
-rw-r--r--	22353	root	root	/usr/share/EMBOSS/doc/programs/text/backtranseq.txt
-rw-r--r--	79944	root	root	/usr/share/EMBOSS/doc/programs/text/banana.txt
-rw-r--r--	17849	root	root	/usr/share/EMBOSS/doc/programs/text/biosed.txt
-rw-r--r--	13581	root	root	/usr/share/EMBOSS/doc/programs/text/btwisted.txt
-rw-r--r--	11441	root	root	/usr/share/EMBOSS/doc/programs/text/cai.txt
-rw-r--r--	12743	root	root	/usr/share/EMBOSS/doc/programs/text/chaos.txt
-rw-r--r--	15618	root	root	/usr/share/EMBOSS/doc/programs/text/charge.txt
-rw-r--r--	10642	root	root	/usr/share/EMBOSS/doc/programs/text/checktrans.txt
-rw-r--r--	12207	root	root	/usr/share/EMBOSS/doc/programs/text/chips.txt
-rw-r--r--	12255	root	root	/usr/share/EMBOSS/doc/programs/text/cirdna.txt
-rw-r--r--	9545	root	root	/usr/share/EMBOSS/doc/programs/text/codcmp.txt
-rw-r--r--	8569	root	root	/usr/share/EMBOSS/doc/programs/text/codcopy.txt
-rw-r--r--	19973	root	root	/usr/share/EMBOSS/doc/programs/text/coderet.txt
-rw-r--r--	16085	root	root	/usr/share/EMBOSS/doc/programs/text/complex.txt
-rw-r--r--	37015	root	root	/usr/share/EMBOSS/doc/programs/text/compseq.txt
-rw-r--r--	10571	root	root	/usr/share/EMBOSS/doc/programs/text/cons.txt
-rw-r--r--	7005	root	root	/usr/share/EMBOSS/doc/programs/text/consambig.txt
-rw-r--r--	17916	root	root	/usr/share/EMBOSS/doc/programs/text/cpgplot.txt
-rw-r--r--	16182	root	root	/usr/share/EMBOSS/doc/programs/text/cpgreport.txt
-rw-r--r--	14015	root	root	/usr/share/EMBOSS/doc/programs/text/cusp.txt
-rw-r--r--	6172	root	root	/usr/share/EMBOSS/doc/programs/text/cutgextract.txt
-rw-r--r--	18684	root	root	/usr/share/EMBOSS/doc/programs/text/cutseq.txt
-rw-r--r--	28334	root	root	/usr/share/EMBOSS/doc/programs/text/dan.txt
-rw-r--r--	10372	root	root	/usr/share/EMBOSS/doc/programs/text/dbiblast.txt
-rw-r--r--	9043	root	root	/usr/share/EMBOSS/doc/programs/text/dbifasta.txt
-rw-r--r--	9477	root	root	/usr/share/EMBOSS/doc/programs/text/dbiflat.txt
-rw-r--r--	10066	root	root	/usr/share/EMBOSS/doc/programs/text/dbigcg.txt
-rw-r--r--	8098	root	root	/usr/share/EMBOSS/doc/programs/text/dbxfasta.txt
-rw-r--r--	8076	root	root	/usr/share/EMBOSS/doc/programs/text/dbxflat.txt
-rw-r--r--	8787	root	root	/usr/share/EMBOSS/doc/programs/text/dbxgcg.txt
-rw-r--r--	8651	root	root	/usr/share/EMBOSS/doc/programs/text/degapseq.txt
-rw-r--r--	18051	root	root	/usr/share/EMBOSS/doc/programs/text/density.txt
-rw-r--r--	9437	root	root	/usr/share/EMBOSS/doc/programs/text/descseq.txt
-rw-r--r--	21498	root	root	/usr/share/EMBOSS/doc/programs/text/diffseq.txt
-rw-r--r--	17471	root	root	/usr/share/EMBOSS/doc/programs/text/digest.txt
-rw-r--r--	19053	root	root	/usr/share/EMBOSS/doc/programs/text/distmat.txt
-rw-r--r--	19685	root	root	/usr/share/EMBOSS/doc/programs/text/dotmatcher.txt
-rw-r--r--	19925	root	root	/usr/share/EMBOSS/doc/programs/text/dotpath.txt
-rw-r--r--	17357	root	root	/usr/share/EMBOSS/doc/programs/text/dottup.txt
-rw-r--r--	39103	root	root	/usr/share/EMBOSS/doc/programs/text/dreg.txt
-rw-r--r--	19045	root	root	/usr/share/EMBOSS/doc/programs/text/edialign.txt
-rw-r--r--	17955	root	root	/usr/share/EMBOSS/doc/programs/text/einverted.txt
-rw-r--r--	28925	root	root	/usr/share/EMBOSS/doc/programs/text/embossdata.txt
-rw-r--r--	4049	root	root	/usr/share/EMBOSS/doc/programs/text/embossversion.txt
-rw-r--r--	61246	root	root	/usr/share/EMBOSS/doc/programs/text/emma.txt
-rw-r--r--	34922	root	root	/usr/share/EMBOSS/doc/programs/text/emowse.txt
-rw-r--r--	14469	root	root	/usr/share/EMBOSS/doc/programs/text/entret.txt
-rw-r--r--	22910	root	root	/usr/share/EMBOSS/doc/programs/text/epestfind.txt
-rw-r--r--	54968	root	root	/usr/share/EMBOSS/doc/programs/text/eprimer3.txt
-rw-r--r--	12090	root	root	/usr/share/EMBOSS/doc/programs/text/equicktandem.txt
-rw-r--r--	32045	root	root	/usr/share/EMBOSS/doc/programs/text/est2genome.txt
-rw-r--r--	12905	root	root	/usr/share/EMBOSS/doc/programs/text/etandem.txt
-rw-r--r--	10691	root	root	/usr/share/EMBOSS/doc/programs/text/extractalign.txt
-rw-r--r--	39838	root	root	/usr/share/EMBOSS/doc/programs/text/extractfeat.txt
-rw-r--r--	20952	root	root	/usr/share/EMBOSS/doc/programs/text/extractseq.txt
-rw-r--r--	10962	root	root	/usr/share/EMBOSS/doc/programs/text/featcopy.txt
-rw-r--r--	14648	root	root	/usr/share/EMBOSS/doc/programs/text/featreport.txt
-rw-r--r--	4849	root	root	/usr/share/EMBOSS/doc/programs/text/findkm.txt
-rw-r--r--	12141	root	root	/usr/share/EMBOSS/doc/programs/text/freak.txt
-rw-r--r--	17595	root	root	/usr/share/EMBOSS/doc/programs/text/frestdist.txt
-rw-r--r--	20939	root	root	/usr/share/EMBOSS/doc/programs/text/fuzznuc.txt
-rw-r--r--	13799	root	root	/usr/share/EMBOSS/doc/programs/text/fuzzpro.txt
-rw-r--r--	23780	root	root	/usr/share/EMBOSS/doc/programs/text/fuzztran.txt
-rw-r--r--	17036	root	root	/usr/share/EMBOSS/doc/programs/text/garnier.txt
-rw-r--r--	7883	root	root	/usr/share/EMBOSS/doc/programs/text/geecee.txt
-rw-r--r--	20687	root	root	/usr/share/EMBOSS/doc/programs/text/getorf.txt
-rw-r--r--	16594	root	root	/usr/share/EMBOSS/doc/programs/text/helixturnhelix.txt
-rw-r--r--	15238	root	root	/usr/share/EMBOSS/doc/programs/text/hmoment.txt
-rw-r--r--	18896	root	root	/usr/share/EMBOSS/doc/programs/text/iep.txt
-rw-r--r--	32867	root	root	/usr/share/EMBOSS/doc/programs/text/infoalign.txt
-rw-r--r--	5221	root	root	/usr/share/EMBOSS/doc/programs/text/infobase.txt
-rw-r--r--	6721	root	root	/usr/share/EMBOSS/doc/programs/text/inforesidue.txt
-rw-r--r--	16020	root	root	/usr/share/EMBOSS/doc/programs/text/infoseq.txt
-rw-r--r--	13832	root	root	/usr/share/EMBOSS/doc/programs/text/isochore.txt
-rw-r--r--	8776	root	root	/usr/share/EMBOSS/doc/programs/text/jaspextract.txt
-rw-r--r--	19193	root	root	/usr/share/EMBOSS/doc/programs/text/jaspscan.txt
-rw-r--r--	2209	root	root	/usr/share/EMBOSS/doc/programs/text/jembossctl.txt
-rw-r--r--	12267	root	root	/usr/share/EMBOSS/doc/programs/text/lindna.txt
-rw-r--r--	12391	root	root	/usr/share/EMBOSS/doc/programs/text/listor.txt
-rw-r--r--	15765	root	root	/usr/share/EMBOSS/doc/programs/text/makenucseq.txt
-rw-r--r--	17982	root	root	/usr/share/EMBOSS/doc/programs/text/makeprotseq.txt
-rw-r--r--	18316	root	root	/usr/share/EMBOSS/doc/programs/text/marscan.txt
-rw-r--r--	7233	root	root	/usr/share/EMBOSS/doc/programs/text/maskambignuc.txt
-rw-r--r--	7275	root	root	/usr/share/EMBOSS/doc/programs/text/maskambigprot.txt
-rw-r--r--	22481	root	root	/usr/share/EMBOSS/doc/programs/text/maskfeat.txt
-rw-r--r--	12920	root	root	/usr/share/EMBOSS/doc/programs/text/maskseq.txt
-rw-r--r--	26123	root	root	/usr/share/EMBOSS/doc/programs/text/matcher.txt
-rw-r--r--	25314	root	root	/usr/share/EMBOSS/doc/programs/text/megamerger.txt
-rw-r--r--	26826	root	root	/usr/share/EMBOSS/doc/programs/text/merger.txt
-rw-r--r--	23598	root	root	/usr/share/EMBOSS/doc/programs/text/msbar.txt
-rw-r--r--	5791	root	root	/usr/share/EMBOSS/doc/programs/text/mwcontam.txt
-rw-r--r--	6504	root	root	/usr/share/EMBOSS/doc/programs/text/mwfilter.txt
-rw-r--r--	25467	root	root	/usr/share/EMBOSS/doc/programs/text/needle.txt
-rw-r--r--	13793	root	root	/usr/share/EMBOSS/doc/programs/text/newcpgreport.txt
-rw-r--r--	12074	root	root	/usr/share/EMBOSS/doc/programs/text/newcpgseek.txt
-rw-r--r--	8678	root	root	/usr/share/EMBOSS/doc/programs/text/newseq.txt
-rw-r--r--	6296	root	root	/usr/share/EMBOSS/doc/programs/text/nohtml.txt
-rw-r--r--	7143	root	root	/usr/share/EMBOSS/doc/programs/text/noreturn.txt
-rw-r--r--	10718	root	root	/usr/share/EMBOSS/doc/programs/text/nospace.txt
-rw-r--r--	6473	root	root	/usr/share/EMBOSS/doc/programs/text/notab.txt
-rw-r--r--	14984	root	root	/usr/share/EMBOSS/doc/programs/text/notseq.txt
-rw-r--r--	10852	root	root	/usr/share/EMBOSS/doc/programs/text/nthseq.txt
-rw-r--r--	12834	root	root	/usr/share/EMBOSS/doc/programs/text/nthseqset.txt
-rw-r--r--	15397	root	root	/usr/share/EMBOSS/doc/programs/text/octanol.txt
-rw-r--r--	9755	root	root	/usr/share/EMBOSS/doc/programs/text/oddcomp.txt
-rw-r--r--	14178	root	root	/usr/share/EMBOSS/doc/programs/text/palindrome.txt
-rw-r--r--	16508	root	root	/usr/share/EMBOSS/doc/programs/text/pasteseq.txt
-rw-r--r--	11453	root	root	/usr/share/EMBOSS/doc/programs/text/patmatdb.txt
-rw-r--r--	19717	root	root	/usr/share/EMBOSS/doc/programs/text/patmatmotifs.txt
-rw-r--r--	13970	root	root	/usr/share/EMBOSS/doc/programs/text/pepcoil.txt
-rw-r--r--	18595	root	root	/usr/share/EMBOSS/doc/programs/text/pepinfo.txt
-rw-r--r--	13102	root	root	/usr/share/EMBOSS/doc/programs/text/pepnet.txt
-rw-r--r--	14835	root	root	/usr/share/EMBOSS/doc/programs/text/pepstats.txt
-rw-r--r--	14281	root	root	/usr/share/EMBOSS/doc/programs/text/pepwheel.txt
-rw-r--r--	14540	root	root	/usr/share/EMBOSS/doc/programs/text/pepwindow.txt
-rw-r--r--	10999	root	root	/usr/share/EMBOSS/doc/programs/text/pepwindowall.txt
-rw-r--r--	10328	root	root	/usr/share/EMBOSS/doc/programs/text/plotcon.txt
-rw-r--r--	20743	root	root	/usr/share/EMBOSS/doc/programs/text/plotorf.txt
-rw-r--r--	8372	root	root	/usr/share/EMBOSS/doc/programs/text/polydot.txt
-rw-r--r--	34928	root	root	/usr/share/EMBOSS/doc/programs/text/preg.txt
-rw-r--r--	16299	root	root	/usr/share/EMBOSS/doc/programs/text/prettyplot.txt
-rw-r--r--	19523	root	root	/usr/share/EMBOSS/doc/programs/text/prettyseq.txt
-rw-r--r--	10843	root	root	/usr/share/EMBOSS/doc/programs/text/primersearch.txt
-rw-r--r--	12320	root	root	/usr/share/EMBOSS/doc/programs/text/printsextract.txt
-rw-r--r--	8927	root	root	/usr/share/EMBOSS/doc/programs/text/profit.txt
-rw-r--r--	33375	root	root	/usr/share/EMBOSS/doc/programs/text/prophecy.txt
-rw-r--r--	23277	root	root	/usr/share/EMBOSS/doc/programs/text/prophet.txt
-rw-r--r--	4829	root	root	/usr/share/EMBOSS/doc/programs/text/prosextract.txt
-rw-r--r--	16683	root	root	/usr/share/EMBOSS/doc/programs/text/pscan.txt
-rw-r--r--	27895	root	root	/usr/share/EMBOSS/doc/programs/text/psiphi.txt
-rw-r--r--	20624	root	root	/usr/share/EMBOSS/doc/programs/text/rebaseextract.txt
-rw-r--r--	15727	root	root	/usr/share/EMBOSS/doc/programs/text/recoder.txt
-rw-r--r--	9900	root	root	/usr/share/EMBOSS/doc/programs/text/redata.txt
-rw-r--r--	43280	root	root	/usr/share/EMBOSS/doc/programs/text/remap.txt
-rw-r--r--	15273	root	root	/usr/share/EMBOSS/doc/programs/text/restover.txt
-rw-r--r--	34317	root	root	/usr/share/EMBOSS/doc/programs/text/restrict.txt
-rw-r--r--	13078	root	root	/usr/share/EMBOSS/doc/programs/text/revseq.txt
-rw-r--r--	11182	root	root	/usr/share/EMBOSS/doc/programs/text/seealso.txt
-rw-r--r--	7892	root	root	/usr/share/EMBOSS/doc/programs/text/seqmatchall.txt
-rw-r--r--	48859	root	root	/usr/share/EMBOSS/doc/programs/text/seqret.txt
-rw-r--r--	13260	root	root	/usr/share/EMBOSS/doc/programs/text/seqretsetall.txt
-rw-r--r--	12299	root	root	/usr/share/EMBOSS/doc/programs/text/seqretsplit.txt
-rw-r--r--	46628	root	root	/usr/share/EMBOSS/doc/programs/text/showalign.txt
-rw-r--r--	32151	root	root	/usr/share/EMBOSS/doc/programs/text/showdb.txt
-rw-r--r--	27071	root	root	/usr/share/EMBOSS/doc/programs/text/showfeat.txt
-rw-r--r--	18504	root	root	/usr/share/EMBOSS/doc/programs/text/showorf.txt
-rw-r--r--	40149	root	root	/usr/share/EMBOSS/doc/programs/text/showpep.txt
-rw-r--r--	54974	root	root	/usr/share/EMBOSS/doc/programs/text/showseq.txt
-rw-r--r--	7656	root	root	/usr/share/EMBOSS/doc/programs/text/shuffleseq.txt
-rw-r--r--	19110	root	root	/usr/share/EMBOSS/doc/programs/text/sigcleave.txt
-rw-r--r--	12724	root	root	/usr/share/EMBOSS/doc/programs/text/silent.txt
-rw-r--r--	43226	root	root	/usr/share/EMBOSS/doc/programs/text/sirna.txt
-rw-r--r--	32178	root	root	/usr/share/EMBOSS/doc/programs/text/sixpack.txt
-rw-r--r--	10952	root	root	/usr/share/EMBOSS/doc/programs/text/sizeseq.txt
-rw-r--r--	18574	root	root	/usr/share/EMBOSS/doc/programs/text/skipredundant.txt
-rw-r--r--	21616	root	root	/usr/share/EMBOSS/doc/programs/text/skipseq.txt
-rw-r--r--	9906	root	root	/usr/share/EMBOSS/doc/programs/text/splitsource.txt
-rw-r--r--	8208	root	root	/usr/share/EMBOSS/doc/programs/text/splitter.txt
-rw-r--r--	21541	root	root	/usr/share/EMBOSS/doc/programs/text/stretcher.txt
-rw-r--r--	6136	root	root	/usr/share/EMBOSS/doc/programs/text/stssearch.txt
-rw-r--r--	22299	root	root	/usr/share/EMBOSS/doc/programs/text/supermatcher.txt
-rw-r--r--	12715	root	root	/usr/share/EMBOSS/doc/programs/text/syco.txt
-rw-r--r--	24040	root	root	/usr/share/EMBOSS/doc/programs/text/tcode.txt
-rw-r--r--	9246	root	root	/usr/share/EMBOSS/doc/programs/text/textsearch.txt
-rw-r--r--	10384	root	root	/usr/share/EMBOSS/doc/programs/text/tfextract.txt
-rw-r--r--	65521	root	root	/usr/share/EMBOSS/doc/programs/text/tfm.txt
-rw-r--r--	14857	root	root	/usr/share/EMBOSS/doc/programs/text/tfscan.txt
-rw-r--r--	11551	root	root	/usr/share/EMBOSS/doc/programs/text/tmap.txt
-rw-r--r--	16100	root	root	/usr/share/EMBOSS/doc/programs/text/tranalign.txt
-rw-r--r--	48925	root	root	/usr/share/EMBOSS/doc/programs/text/transeq.txt
-rw-r--r--	16488	root	root	/usr/share/EMBOSS/doc/programs/text/trimest.txt
-rw-r--r--	14063	root	root	/usr/share/EMBOSS/doc/programs/text/trimseq.txt
-rw-r--r--	11001	root	root	/usr/share/EMBOSS/doc/programs/text/trimspace.txt
-rw-r--r--	28126	root	root	/usr/share/EMBOSS/doc/programs/text/twofeat.txt
-rw-r--r--	9136	root	root	/usr/share/EMBOSS/doc/programs/text/union.txt
-rw-r--r--	15045	root	root	/usr/share/EMBOSS/doc/programs/text/vectorstrip.txt
-rw-r--r--	25852	root	root	/usr/share/EMBOSS/doc/programs/text/water.txt
-rw-r--r--	9659	root	root	/usr/share/EMBOSS/doc/programs/text/whichdb.txt
-rw-r--r--	11382	root	root	/usr/share/EMBOSS/doc/programs/text/wobble.txt
-rw-r--r--	10678	root	root	/usr/share/EMBOSS/doc/programs/text/wordcount.txt
-rw-r--r--	21848	root	root	/usr/share/EMBOSS/doc/programs/text/wordfinder.txt
-rw-r--r--	19392	root	root	/usr/share/EMBOSS/doc/programs/text/wordmatch.txt
-rw-r--r--	60168	root	root	/usr/share/EMBOSS/doc/programs/text/wossname.txt
-rw-r--r--	14147	root	root	/usr/share/EMBOSS/doc/programs/text/yank.txt
-rw-r--r--	92672	root	root	/usr/share/EMBOSS/doc/tutorials/emboss-gcg.ppt
-rw-r--r--	129024	root	root	/usr/share/EMBOSS/doc/tutorials/emboss-interfaces.ppt
-rw-r--r--	134656	root	root	/usr/share/EMBOSS/doc/tutorials/emboss-talk.ppt
-rw-r--r--	643166	root	root	/usr/share/EMBOSS/doc/tutorials/emboss_tut.tar.gz
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/data
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/embl
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/genbank
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/pir
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/swiss
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/swnew
drwxr-xr-x	4096	root	root	/usr/share/EMBOSS/test/testdb
-rw-r--r--	990	root	root	/usr/share/EMBOSS/test/data/104k.nbrf
-rw-r--r--	13439	root	root	/usr/share/EMBOSS/test/data/aaindex1.test
-rw-r--r--	72	root	root	/usr/share/EMBOSS/test/data/aligna.dna
-rw-r--r--	86	root	root	/usr/share/EMBOSS/test/data/aligna.prot
-rw-r--r--	64	root	root	/usr/share/EMBOSS/test/data/alignapart.dna
-rw-r--r--	64	root	root	/usr/share/EMBOSS/test/data/alignapart.prot
-rw-r--r--	20	root	root	/usr/share/EMBOSS/test/data/alignb.dna
-rw-r--r--	86	root	root	/usr/share/EMBOSS/test/data/alignb.prot
-rw-r--r--	16253	root	root	/usr/share/EMBOSS/test/data/cutg.codon
-rw-r--r--	117	root	root	/usr/share/EMBOSS/test/data/dna.acedb
-rw-r--r--	0	root	root	/usr/share/EMBOSS/test/data/dna.aln
-rw-r--r--	957	root	root	/usr/share/EMBOSS/test/data/dna.asn1
-rw-r--r--	423	root	root	/usr/share/EMBOSS/test/data/dna.codata
-rw-r--r--	487	root	root	/usr/share/EMBOSS/test/data/dna.embl
-rw-r--r--	143	root	root	/usr/share/EMBOSS/test/data/dna.fasta
-rw-r--r--	543	root	root	/usr/share/EMBOSS/test/data/dna.fitch
-rw-r--r--	363	root	root	/usr/share/EMBOSS/test/data/dna.gcg
-rw-r--r--	183	root	root	/usr/share/EMBOSS/test/data/dna.gcg8
-rw-r--r--	268	root	root	/usr/share/EMBOSS/test/data/dna.genbank
-rw-r--r--	141	root	root	/usr/share/EMBOSS/test/data/dna.ig
-rw-r--r--	420	root	root	/usr/share/EMBOSS/test/data/dna.m-acedb
-rw-r--r--	1416	root	root	/usr/share/EMBOSS/test/data/dna.m-codata
-rw-r--r--	945	root	root	/usr/share/EMBOSS/test/data/dna.m-embl
-rw-r--r--	516	root	root	/usr/share/EMBOSS/test/data/dna.m-fasta
-rw-r--r--	2199	root	root	/usr/share/EMBOSS/test/data/dna.m-fasta-long
-rw-r--r--	594	root	root	/usr/share/EMBOSS/test/data/dna.m-ncbi
-rw-r--r--	648	root	root	/usr/share/EMBOSS/test/data/dna.m-strider
-rw-r--r--	820	root	root	/usr/share/EMBOSS/test/data/dna.msf
-rw-r--r--	1084	root	root	/usr/share/EMBOSS/test/data/dna.msf8
-rw-r--r--	145	root	root	/usr/share/EMBOSS/test/data/dna.ncbi
-rw-r--r--	495	root	root	/usr/share/EMBOSS/test/data/dna.phylip
-rw-r--r--	492	root	root	/usr/share/EMBOSS/test/data/dna.phylip3
-rw-r--r--	102	root	root	/usr/share/EMBOSS/test/data/dna.staden
-rw-r--r--	168	root	root	/usr/share/EMBOSS/test/data/dna.strider
-rw-r--r--	102	root	root	/usr/share/EMBOSS/test/data/dna.text
-rw-r--r--	33351	root	root	/usr/share/EMBOSS/test/data/feat.emft
-rw-r--r--	33668	root	root	/usr/share/EMBOSS/test/data/feat.fasta
-rw-r--r--	1340	root	root	/usr/share/EMBOSS/test/data/feat.pir
-rw-r--r--	33	root	root	/usr/share/EMBOSS/test/data/mw1.dat
-rw-r--r--	33	root	root	/usr/share/EMBOSS/test/data/mw2.dat
-rw-r--r--	50	root	root	/usr/share/EMBOSS/test/data/mw3.dat
-rw-r--r--	98	root	root	/usr/share/EMBOSS/test/data/nuc.pat
-rw-r--r--	37	root	root	/usr/share/EMBOSS/test/data/nucseq.pat
-rw-r--r--	26	root	root	/usr/share/EMBOSS/test/data/nucsimple.pat
-rw-r--r--	1559	root	root	/usr/share/EMBOSS/test/data/opsd.msf
-rw-r--r--	2043	root	root	/usr/share/EMBOSS/test/data/paamir.gff
-rw-r--r--	2040	root	root	/usr/share/EMBOSS/test/data/paamir.gff3
-rw-r--r--	821	root	root	/usr/share/EMBOSS/test/data/paamir.pep
-rw-r--r--	1747	root	root	/usr/share/EMBOSS/test/data/pax6_cdna.fasta
-rw-r--r--	480487	root	root	/usr/share/EMBOSS/test/data/prints.test
-rw-r--r--	170683	root	root	/usr/share/EMBOSS/test/data/prosite.dat
-rw-r--r--	17090	root	root	/usr/share/EMBOSS/test/data/prosite.doc
-rw-r--r--	121	root	root	/usr/share/EMBOSS/test/data/prot.acedb
-rw-r--r--	419	root	root	/usr/share/EMBOSS/test/data/prot.codata
-rw-r--r--	149	root	root	/usr/share/EMBOSS/test/data/prot.fasta
-rw-r--r--	251	root	root	/usr/share/EMBOSS/test/data/prot.gcg
-rw-r--r--	225	root	root	/usr/share/EMBOSS/test/data/prot.gcg8
-rw-r--r--	158	root	root	/usr/share/EMBOSS/test/data/prot.ig
-rw-r--r--	309	root	root	/usr/share/EMBOSS/test/data/prot.m-acedb
-rw-r--r--	1131	root	root	/usr/share/EMBOSS/test/data/prot.m-codata
-rw-r--r--	406	root	root	/usr/share/EMBOSS/test/data/prot.m-fasta
-rw-r--r--	448	root	root	/usr/share/EMBOSS/test/data/prot.m-nbrf
-rw-r--r--	410	root	root	/usr/share/EMBOSS/test/data/prot.m-ncbi
-rw-r--r--	766	root	root	/usr/share/EMBOSS/test/data/prot.m-swiss
-rw-r--r--	132	root	root	/usr/share/EMBOSS/test/data/prot.nbrf
-rw-r--r--	151	root	root	/usr/share/EMBOSS/test/data/prot.ncbi
-rw-r--r--	273	root	root	/usr/share/EMBOSS/test/data/prot.swiss
-rw-r--r--	102	root	root	/usr/share/EMBOSS/test/data/prot.text
-rw-r--r--	6969	root	root	/usr/share/EMBOSS/test/data/site.dat
-rw-r--r--	756	root	root	/usr/share/EMBOSS/test/data/tranalign.pep
-rw-r--r--	2675	root	root	/usr/share/EMBOSS/test/data/tranalign.seq
-rw-r--r--	536	root	root	/usr/share/EMBOSS/test/data/untrimmed.seq
-rw-r--r--	278	root	root	/usr/share/EMBOSS/test/data/vtest.seq
-rw-r--r--	25336	root	root	/usr/share/EMBOSS/test/data/withrefm
-rw-r--r--	22634	root	root	/usr/share/EMBOSS/test/data/z83307.seq
-rw-r--r--	916	root	root	/usr/share/EMBOSS/test/embl/acnum.hit
-rw-r--r--	2732	root	root	/usr/share/EMBOSS/test/embl/acnum.trg
-rw-r--r--	2080	root	root	/usr/share/EMBOSS/test/embl/des.hit
-rw-r--r--	6132	root	root	/usr/share/EMBOSS/test/embl/des.trg
-rw-r--r--	520	root	root	/usr/share/EMBOSS/test/embl/division.lkp
-rw-r--r--	1182	root	root	/usr/share/EMBOSS/test/embl/entrynam.idx
-rw-r--r--	4483	root	root	/usr/share/EMBOSS/test/embl/est.dat
-rw-r--r--	2558	root	root	/usr/share/EMBOSS/test/embl/fun.dat
-rw-r--r--	4055953	root	root	/usr/share/EMBOSS/test/embl/hum1.dat
-rw-r--r--	107546	root	root	/usr/share/EMBOSS/test/embl/inv.dat
-rw-r--r--	668	root	root	/usr/share/EMBOSS/test/embl/keyword.hit
-rw-r--r--	4356	root	root	/usr/share/EMBOSS/test/embl/keyword.trg
-rw-r--r--	6681	root	root	/usr/share/EMBOSS/test/embl/pln.dat
-rw-r--r--	74489	root	root	/usr/share/EMBOSS/test/embl/pro.dat
-rw-r--r--	20726	root	root	/usr/share/EMBOSS/test/embl/rod.dat
-rw-r--r--	496	root	root	/usr/share/EMBOSS/test/embl/seqvn.hit
-rw-r--r--	1182	root	root	/usr/share/EMBOSS/test/embl/seqvn.trg
-rw-r--r--	2244	root	root	/usr/share/EMBOSS/test/embl/sts.dat
-rw-r--r--	3016	root	root	/usr/share/EMBOSS/test/embl/taxon.hit
-rw-r--r--	5025	root	root	/usr/share/EMBOSS/test/embl/taxon.trg
-rw-r--r--	3323	root	root	/usr/share/EMBOSS/test/embl/vrl.dat
-rw-r--r--	30178	root	root	/usr/share/EMBOSS/test/embl/vrt.dat
-rw-r--r--	620	root	root	/usr/share/EMBOSS/test/genbank/acnum.hit
-rw-r--r--	1580	root	root	/usr/share/EMBOSS/test/genbank/acnum.trg
-rw-r--r--	1656	root	root	/usr/share/EMBOSS/test/genbank/des.hit
-rw-r--r--	5052	root	root	/usr/share/EMBOSS/test/genbank/des.trg
-rw-r--r--	520	root	root	/usr/share/EMBOSS/test/genbank/division.lkp
-rw-r--r--	1041	root	root	/usr/share/EMBOSS/test/genbank/entrynam.idx
-rw-r--r--	71198	root	root	/usr/share/EMBOSS/test/genbank/gbbct1.seq
-rw-r--r--	4092	root	root	/usr/share/EMBOSS/test/genbank/gbest1.seq
-rw-r--r--	99500	root	root	/usr/share/EMBOSS/test/genbank/gbinv1.seq
-rw-r--r--	2312	root	root	/usr/share/EMBOSS/test/genbank/gbpln1.seq
-rw-r--r--	6731	root	root	/usr/share/EMBOSS/test/genbank/gbpln2.seq
-rw-r--r--	3700855	root	root	/usr/share/EMBOSS/test/genbank/gbpri1.seq
-rw-r--r--	9698	root	root	/usr/share/EMBOSS/test/genbank/gbrod1.seq
-rw-r--r--	2194	root	root	/usr/share/EMBOSS/test/genbank/gbsts1.seq
-rw-r--r--	3191	root	root	/usr/share/EMBOSS/test/genbank/gbvrl1.seq
-rw-r--r--	19086	root	root	/usr/share/EMBOSS/test/genbank/gbvrt.seq
-rw-r--r--	648	root	root	/usr/share/EMBOSS/test/genbank/keyword.hit
-rw-r--r--	4252	root	root	/usr/share/EMBOSS/test/genbank/keyword.trg
-rw-r--r--	612	root	root	/usr/share/EMBOSS/test/genbank/seqvn.hit
-rw-r--r--	1704	root	root	/usr/share/EMBOSS/test/genbank/seqvn.trg
-rw-r--r--	2300	root	root	/usr/share/EMBOSS/test/genbank/taxon.hit
-rw-r--r--	3625	root	root	/usr/share/EMBOSS/test/genbank/taxon.trg
-rw-r--r--	672	root	root	/usr/share/EMBOSS/test/pir/acnum.hit
-rw-r--r--	1392	root	root	/usr/share/EMBOSS/test/pir/acnum.trg
-rw-r--r--	1576	root	root	/usr/share/EMBOSS/test/pir/des.hit
-rw-r--r--	3292	root	root	/usr/share/EMBOSS/test/pir/des.trg
-rw-r--r--	388	root	root	/usr/share/EMBOSS/test/pir/division.lkp
-rw-r--r--	1260	root	root	/usr/share/EMBOSS/test/pir/entrynam.idx
-rw-r--r--	2196	root	root	/usr/share/EMBOSS/test/pir/keyword.hit
-rw-r--r--	828	root	root	/usr/share/EMBOSS/test/pir/keyword.trg
-rw-r--r--	130	root	root	/usr/share/EMBOSS/test/pir/pir1.header
-rw-r--r--	1372	root	root	/usr/share/EMBOSS/test/pir/pir1.names
-rw-r--r--	1024	root	root	/usr/share/EMBOSS/test/pir/pir1.numbers
-rw-r--r--	2352	root	root	/usr/share/EMBOSS/test/pir/pir1.offset
-rw-r--r--	59920	root	root	/usr/share/EMBOSS/test/pir/pir1.ref
-rw-r--r--	7772	root	root	/usr/share/EMBOSS/test/pir/pir1.seq
-rw-r--r--	130	root	root	/usr/share/EMBOSS/test/pir/pir2.header
-rw-r--r--	140	root	root	/usr/share/EMBOSS/test/pir/pir2.names
-rw-r--r--	112	root	root	/usr/share/EMBOSS/test/pir/pir2.numbers
-rw-r--r--	240	root	root	/usr/share/EMBOSS/test/pir/pir2.offset
-rw-r--r--	5512	root	root	/usr/share/EMBOSS/test/pir/pir2.ref
-rw-r--r--	836	root	root	/usr/share/EMBOSS/test/pir/pir2.seq
-rw-r--r--	130	root	root	/usr/share/EMBOSS/test/pir/pir3.header
-rw-r--r--	84	root	root	/usr/share/EMBOSS/test/pir/pir3.names
-rw-r--r--	48	root	root	/usr/share/EMBOSS/test/pir/pir3.numbers
-rw-r--r--	144	root	root	/usr/share/EMBOSS/test/pir/pir3.offset
-rw-r--r--	1674	root	root	/usr/share/EMBOSS/test/pir/pir3.ref
-rw-r--r--	1150	root	root	/usr/share/EMBOSS/test/pir/pir3.seq
-rw-r--r--	130	root	root	/usr/share/EMBOSS/test/pir/pir4.header
-rw-r--r--	84	root	root	/usr/share/EMBOSS/test/pir/pir4.names
-rw-r--r--	64	root	root	/usr/share/EMBOSS/test/pir/pir4.numbers
-rw-r--r--	144	root	root	/usr/share/EMBOSS/test/pir/pir4.offset
-rw-r--r--	3580	root	root	/usr/share/EMBOSS/test/pir/pir4.ref
-rw-r--r--	457	root	root	/usr/share/EMBOSS/test/pir/pir4.seq
-rw-r--r--	768	root	root	/usr/share/EMBOSS/test/pir/taxon.hit
-rw-r--r--	4944	root	root	/usr/share/EMBOSS/test/pir/taxon.trg
-rw-r--r--	1152	root	root	/usr/share/EMBOSS/test/swiss/acnum.hit
-rw-r--r--	2946	root	root	/usr/share/EMBOSS/test/swiss/acnum.trg
-rw-r--r--	3360	root	root	/usr/share/EMBOSS/test/swiss/des.hit
-rw-r--r--	5525	root	root	/usr/share/EMBOSS/test/swiss/des.trg
-rw-r--r--	322	root	root	/usr/share/EMBOSS/test/swiss/division.lkp
-rw-r--r--	2400	root	root	/usr/share/EMBOSS/test/swiss/entrynam.idx
-rw-r--r--	3324	root	root	/usr/share/EMBOSS/test/swiss/keyword.hit
-rw-r--r--	5925	root	root	/usr/share/EMBOSS/test/swiss/keyword.trg
-rw-r--r--	786341	root	root	/usr/share/EMBOSS/test/swiss/seq.dat
-rw-r--r--	700	root	root	/usr/share/EMBOSS/test/swiss/seqvn.hit
-rw-r--r--	1900	root	root	/usr/share/EMBOSS/test/swiss/seqvn.trg
-rw-r--r--	6080	root	root	/usr/share/EMBOSS/test/swiss/taxon.hit
-rw-r--r--	13628	root	root	/usr/share/EMBOSS/test/swiss/taxon.trg
-rw-r--r--	336	root	root	/usr/share/EMBOSS/test/swnew/acnum.hit
-rw-r--r--	426	root	root	/usr/share/EMBOSS/test/swnew/acnum.trg
-rw-r--r--	536	root	root	/usr/share/EMBOSS/test/swnew/des.hit
-rw-r--r--	1402	root	root	/usr/share/EMBOSS/test/swnew/des.trg
-rw-r--r--	322	root	root	/usr/share/EMBOSS/test/swnew/division.lkp
-rw-r--r--	498	root	root	/usr/share/EMBOSS/test/swnew/entrynam.idx
-rw-r--r--	408	root	root	/usr/share/EMBOSS/test/swnew/keyword.hit
-rw-r--r--	1020	root	root	/usr/share/EMBOSS/test/swnew/keyword.trg
-rw-r--r--	336	root	root	/usr/share/EMBOSS/test/swnew/seqvn.hit
-rw-r--r--	444	root	root	/usr/share/EMBOSS/test/swnew/seqvn.trg
-rw-r--r--	1056	root	root	/usr/share/EMBOSS/test/swnew/taxon.hit
-rw-r--r--	867	root	root	/usr/share/EMBOSS/test/swnew/taxon.trg
-rw-r--r--	24448	root	root	/usr/share/EMBOSS/test/swnew/trembl.dat
-rw-r--r--	316	root	root	/usr/share/EMBOSS/test/testdb/acnum.hit
-rw-r--r--	364	root	root	/usr/share/EMBOSS/test/testdb/acnum.trg
-rw-r--r--	412	root	root	/usr/share/EMBOSS/test/testdb/des.hit
-rw-r--r--	412	root	root	/usr/share/EMBOSS/test/testdb/des.trg
-rw-r--r--	322	root	root	/usr/share/EMBOSS/test/testdb/division.lkp
-rw-r--r--	368	root	root	/usr/share/EMBOSS/test/testdb/entrynam.idx
-rw-r--r--	488	root	root	/usr/share/EMBOSS/test/testdb/testdb.fasta
drwxr-xr-x	4096	root	root	/usr/share/doc/emboss
-rw-r--r--	1417	root	root	/usr/share/doc/emboss/AUTHORS
-rw-r--r--	17989	root	root	/usr/share/doc/emboss/COPYING
-rw-r--r--	138295	root	root	/usr/share/doc/emboss/ChangeLog
-rw-r--r--	26421	root	root	/usr/share/doc/emboss/FAQ
-rw-r--r--	11154	root	root	/usr/share/doc/emboss/INSTALL
-rw-r--r--	14978	root	root	/usr/share/doc/emboss/LICENSE
-rw-r--r--	3671	root	root	/usr/share/doc/emboss/NEWS
-rw-r--r--	4134	root	root	/usr/share/doc/emboss/README
-rw-r--r--	2420	root	root	/usr/share/doc/emboss/THANKS