<?php set_time_limit(0); require "Science/Chemistry/PDBFile.php"; $file = new Science_Chemistry_PDBFile("small.pdb"); //$file = new Science_Chemistry_PDBFile("1hca.pdb"); for ($j=0; $j < $file->num_macromolecules; $j++) { $mol =& $file->macromolecules[$j]; echo $mol->toCML("model", ($j + 1)); /* for ($i=0; $i < $mol->num_molecules; $i++) { echo $mol->molecules[$i]->id." - atoms: "; echo $mol->molecules[$i]->num_atoms."\n"; } */ echo "\n================\n\n"; } ?>