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<h1>vtkMINCImageReader Class Reference</h1><!-- doxytag: class="vtkMINCImageReader" --><!-- doxytag: inherits="vtkImageReader2" --><code>#include <<a class="el" href="a04944.html">vtkMINCImageReader.h</a>></code>
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<div class="dynheader">
Inheritance diagram for vtkMINCImageReader:</div>
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<p><center><img src="a12202.png" border="0" usemap="#a12203" alt="Inheritance graph"></center>
<map name="a12203">
<area shape="rect" href="a00815.html" title="Superclass of binary file readers." alt="" coords="17,304,148,331"><area shape="rect" href="a00727.html" title="Generic algorithm superclass for image algs." alt="" coords="15,230,151,256"><area shape="rect" href="a00101.html" title="Superclass for all sources, filters, and sinks in VTK." alt="" coords="33,155,132,182"><area shape="rect" href="a01084.html" title="abstract base class for most VTK objects" alt="" coords="43,80,123,107"><area shape="rect" href="a01085.html" title="abstract base class for most VTK objects" alt="" coords="28,6,137,32"></map>
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Collaboration diagram for vtkMINCImageReader:</div>
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<p><center><img src="a12204.png" border="0" usemap="#a12205" alt="Collaboration graph"></center>
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<area shape="rect" href="a00815.html" title="Superclass of binary file readers." alt="" coords="1648,209,1779,236"><area shape="rect" href="a00727.html" title="Generic algorithm superclass for image algs." alt="" coords="1382,213,1518,240"><area shape="rect" href="a00101.html" title="Superclass for all sources, filters, and sinks in VTK." alt="" coords="1044,357,1143,384"><area shape="rect" href="a00472.html" title="Superclass for all pipeline executives in VTK." alt="" coords="1400,451,1499,477"><area shape="rect" href="a01084.html" title="abstract base class for most VTK objects" alt="" coords="444,315,524,341"><area shape="rect" href="a00895.html" title="Store zero or more vtkInformation instances." alt="" coords="675,407,824,433"><area shape="rect" href="a00872.html" title="Store vtkAlgorithm input/output information." alt="" coords="695,224,804,251"><area shape="rect" href="a00081.html" title="Abstract superclass for all arrays." alt="" coords="1032,275,1155,301"><area shape="rect" href="a01043.html" title="A container for a MINC image header." alt="" coords="1959,295,2127,321"><area shape="rect" href="a01513.html" title="map scalar values into colors" alt="" coords="850,569,991,596"><area shape="rect" href="a00998.html" title="represent and manipulate 4x4 transformation matrices" alt="" coords="1227,97,1326,124"><area shape="rect" href="a01085.html" title="abstract base class for most VTK objects" alt="" coords="7,59,116,85"><area shape="rect" href="a00884.html" title="internal structure for vtkInformation" alt="" coords="403,27,566,53"><area shape="rect" href="a00886.html" title="Superclass for vtkInformation keys." alt="" coords="170,5,300,32"><area shape="rect" href="a01719.html" title="record modification and/or execution time" alt="" coords="180,571,290,597"><area shape="rect" href="a00980.html" title="map scalar values into colors via a lookup table" alt="" coords="1984,541,2102,568"><area shape="rect" href="a00891.html" title="Key for pointer to pointer." alt="" coords="394,83,575,109"><area shape="rect" href="a01619.html" title="Subclass of vtkAbstractArray that holds vtkStdStrings." alt="" coords="1395,267,1504,293"><area shape="rect" href="a00356.html" title="abstract superclass for arrays of numeric data" alt="" coords="1399,400,1500,427"><area shape="rect" href="a01607.html" title="Wrapper around vtkstd::string to keep symbols short." alt="" coords="1046,209,1142,236"><area shape="rect" href="a00722.html" title="dynamic, self-adjusting array of vtkIdType" alt="" coords="1656,356,1771,383"><area shape="rect" href="a01784.html" title="dynamic, self-adjusting array of unsigned char" alt="" coords="1634,457,1794,484"><area shape="rect" href="a00436.html" title="dynamic, self-adjusting array of double" alt="" coords="1656,407,1771,433"></map>
<center><font size="2">[<a href="graph_legend.html">legend</a>]</font></center></div>
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<a href="a12206.html">List of all members.</a><hr><a name="_details"></a><h2>Detailed Description</h2>
A reader for MINC files.
<p>
MINC is a NetCDF-based medical image file format that was developed at the Montreal Neurological Institute in 1992. This class will read a MINC file into VTK, rearranging the data to match the VTK x, y, and z dimensions, and optionally rescaling real-valued data to VTK_FLOAT if <a class="el" href="a01044.html#93803a2313d51d30b8e3824023cd80f3">RescaleRealValuesOn()</a> is set. If RescaleRealValues is off, then the data will be stored in its original data type and the <a class="el" href="a01044.html#48adf79a5802e839a4209d55b8262f3a">GetRescaleSlope()</a>, <a class="el" href="a01044.html#07a8c460e695e2b591a800e32f59a78d">GetRescaleIntercept()</a> method can be used to retrieve global rescaling parameters. If the original file had a time dimension, the <a class="el" href="a01044.html#ce758c3d5dc96a54434a6042650ef22b">SetTimeStep()</a> method can be used to specify a time step to read. All of the original header information can be accessed though the <a class="el" href="a01044.html#7e7d608cce8c998b427183f988238ddb">GetImageAttributes()</a> method. <dl class="see" compact><dt><b>See also:</b></dt><dd><a class="el" href="a01045.html" title="A writer for MINC files.">vtkMINCImageWriter</a> <a class="el" href="a01043.html" title="A container for a MINC image header.">vtkMINCImageAttributes</a> </dd></dl>
<dl class="user" compact><dt><b>Thanks:</b></dt><dd>Thanks to David Gobbi for writing this class and Atamai Inc. for contributing it to VTK.</dd></dl>
<dl class="user" compact><dt><b>Tests:</b></dt><dd><a class="el" href="c2_vtk_t_10.html#c2_vtk_t_vtkMINCImageReader">vtkMINCImageReader (Tests)</a> </dd></dl>
<p>Definition at line <a class="el" href="a04944.html#l00086">86</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<tr><td colspan="2"><br><h2>Public Types</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">typedef <a class="el" href="a00815.html">vtkImageReader2</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#377ddf01647201138d276682a90acbc0">Superclass</a></td></tr>
<tr><td colspan="2"><br><h2>Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#da7ff920afbe5ce76258d8b7d8b5466f">GetClassName</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#94d1e2553aa6d0be6542b8526eea0049">IsA</a> (const char *type)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#d50134f6edb88b336f6f3c239d42826e">PrintSelf</a> (ostream &os, <a class="el" href="a00869.html">vtkIndent</a> indent)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#90a34b0fe21da215b73d67097093a91b">SetFileName</a> (const char *name)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#6f7c0d1075a862f8282d38f34ac504b6">CanReadFile</a> (const char *name)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual <a class="el" href="a00998.html">vtkMatrix4x4</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#dbaa540e0409ff4453b615201b55f1d8">GetDirectionCosines</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#eaf8f7a52ecd1b68d6f95254cb3c1c4b">GetNumberOfTimeSteps</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual <a class="el" href="a01043.html">vtkMINCImageAttributes</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#7e7d608cce8c998b427183f988238ddb">GetImageAttributes</a> ()</td></tr>
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<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#944586e27cc6975287e4a1cdda955b2f">GetFileExtensions</a> ()</td></tr>
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<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual const char * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#9c95dd27a053bbd1b554ee4289659551">GetDescriptiveName</a> ()</td></tr>
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<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#48adf79a5802e839a4209d55b8262f3a">GetRescaleSlope</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#07a8c460e695e2b591a800e32f59a78d">GetRescaleIntercept</a> ()</td></tr>
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<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#2ecc97f2a2a238b437a6f57c4d057dee">SetRescaleRealValues</a> (int)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#93803a2313d51d30b8e3824023cd80f3">RescaleRealValuesOn</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#65425b84f538cb0442e531f384df1398">RescaleRealValuesOff</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#835901cbc2f3a709d2578e4f83b5b912">GetRescaleRealValues</a> ()</td></tr>
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<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual double * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#173caa5b2048eb51c71f6bf45d32d981">GetDataRange</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#f087792b766fb4a8ab51a490a7b0710d">GetDataRange</a> (double range[2])</td></tr>
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<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#ce758c3d5dc96a54434a6042650ef22b">SetTimeStep</a> (int)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#707f6eba94c78ef300436694646f1903">GetTimeStep</a> ()</td></tr>
<tr><td colspan="2"><br><h2>Static Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">static int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#ab8b164d6c965e7c09ee32f859ccf53b">IsTypeOf</a> (const char *type)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">static <a class="el" href="a01044.html">vtkMINCImageReader</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#538ff7fe69ca755e8f665c6a3ea8143c">SafeDownCast</a> (<a class="el" href="a01084.html">vtkObject</a> *o)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">static <a class="el" href="a01044.html">vtkMINCImageReader</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#afc39cb112a1838ea70b340634885e97">New</a> ()</td></tr>
<tr><td colspan="2"><br><h2>Protected Member Functions</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#c5cb9ff24b0388ec7c261c84d829a1fe">vtkMINCImageReader</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#21e17f5d4ff0eecf7fd057611b9a8195">~vtkMINCImageReader</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#b3633de7393ce4b46011fdfae6019ec9">OpenNetCDFFile</a> (const char *filename, int &ncid)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#107e7f1a299edc38a74f5238d7d1d09b">CloseNetCDFFile</a> (int ncid)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#3dfa146f66f1bade6156f01ba55af9d5">IndexFromDimensionName</a> (const char *dimName)</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#ce49f5df8f7865cb6e49986fd2c6b340">ReadMINCFileAttributes</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#ee3b84d63c57fceb4c0f957d080ca9eb">FindRangeAndRescaleValues</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#a5ec39bbfbeccaf4fc7c1a4648eb891f">ExecuteInformation</a> ()</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#3b1ec089b4075f8fbfa6d18537e2d237">ExecuteData</a> (<a class="el" href="a00362.html">vtkDataObject</a> *out)</td></tr>
<tr><td colspan="2"><br><h2>Static Protected Member Functions</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">static int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#7ea7045ea434479dec461da5c988da8d">ConvertMINCTypeToVTKType</a> (int minctype, int mincsigned)</td></tr>
<tr><td colspan="2"><br><h2>Protected Attributes</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#f01246e0cf19de8aadc40019c519c287">MINCImageType</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#735476e010110275467bae63626d2825">MINCImageTypeSigned</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#fd5bf6c0f52d450d482be523c245e223">ValidRange</a> [2]</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#4d0f4a7a3312ece9dd61ea7737e789fe">ImageRange</a> [2]</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#dd68cb3659f69a0e098baa33aec1ce81">DataRange</a> [2]</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#8ee0ec8e0b2ac2d13e0602c5673fac47">NumberOfTimeSteps</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#fdef0564d0294b5cb693999204bb4342">TimeStep</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="el" href="a00998.html">vtkMatrix4x4</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#fc7ea146a2f5ec5a3169868c9580653d">DirectionCosines</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#d91f6f2edaa4b1b124d33a5796a1bfe2">RescaleSlope</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#76bd1931b448844db5684105d663ab13">RescaleIntercept</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#b88e31d7fa9bc139e414cacfc41c9faa">RescaleRealValues</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="el" href="a01043.html">vtkMINCImageAttributes</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#c2aff32dc6bc45f06d71692691bd542b">ImageAttributes</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="a01044.html#7ed307c7c5325990088769afee35cdff">FileNameHasChanged</a></td></tr>
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<hr><h2>Member Typedef Documentation</h2>
<a class="anchor" name="377ddf01647201138d276682a90acbc0"></a><!-- doxytag: member="vtkMINCImageReader::Superclass" ref="377ddf01647201138d276682a90acbc0" args="" -->
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<td class="memname">typedef <a class="el" href="a00815.html">vtkImageReader2</a> <a class="el" href="a00815.html">vtkMINCImageReader::Superclass</a> </td>
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<p>Reimplemented from <a class="el" href="a00815.html#d65e9b397e94b7d25b8534dee1b83d71">vtkImageReader2</a>.</p>
<p>Definition at line <a class="el" href="a04944.html#l00089">89</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<hr><h2>Constructor & Destructor Documentation</h2>
<a class="anchor" name="c5cb9ff24b0388ec7c261c84d829a1fe"></a><!-- doxytag: member="vtkMINCImageReader::vtkMINCImageReader" ref="c5cb9ff24b0388ec7c261c84d829a1fe" args="()" -->
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<td class="memname">vtkMINCImageReader::vtkMINCImageReader </td>
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<td><code> [protected]</code></td>
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<a class="anchor" name="21e17f5d4ff0eecf7fd057611b9a8195"></a><!-- doxytag: member="vtkMINCImageReader::~vtkMINCImageReader" ref="21e17f5d4ff0eecf7fd057611b9a8195" args="()" -->
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<td class="memname">vtkMINCImageReader::~vtkMINCImageReader </td>
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<td><code> [protected]</code></td>
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<hr><h2>Member Function Documentation</h2>
<a class="anchor" name="da7ff920afbe5ce76258d8b7d8b5466f"></a><!-- doxytag: member="vtkMINCImageReader::GetClassName" ref="da7ff920afbe5ce76258d8b7d8b5466f" args="()" -->
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<td class="memname">virtual const char* vtkMINCImageReader::GetClassName </td>
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<p>Reimplemented from <a class="el" href="a00815.html#595ce4dd3d011b414fcaa9dd6a4956c2">vtkImageReader2</a>.</p>
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<a class="anchor" name="ab8b164d6c965e7c09ee32f859ccf53b"></a><!-- doxytag: member="vtkMINCImageReader::IsTypeOf" ref="ab8b164d6c965e7c09ee32f859ccf53b" args="(const char *type)" -->
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<td class="memname">static int vtkMINCImageReader::IsTypeOf </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"> <em>name</em> </td>
<td> ) </td>
<td><code> [static]</code></td>
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<p>
Return 1 if this class type is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeRevisionMacro found in vtkSetGet.h.
<p>Reimplemented from <a class="el" href="a00815.html#3c77a01fa1c4cb8b44ae68258191750a">vtkImageReader2</a>.</p>
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<a class="anchor" name="94d1e2553aa6d0be6542b8526eea0049"></a><!-- doxytag: member="vtkMINCImageReader::IsA" ref="94d1e2553aa6d0be6542b8526eea0049" args="(const char *type)" -->
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<td class="memname">virtual int vtkMINCImageReader::IsA </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"> <em>name</em> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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<p>
Return 1 if this class is the same type of (or a subclass of) the named class. Returns 0 otherwise. This method works in combination with vtkTypeRevisionMacro found in vtkSetGet.h.
<p>Reimplemented from <a class="el" href="a00815.html#f767a1c18bcff32c317788bbeecabeba">vtkImageReader2</a>.</p>
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<a class="anchor" name="538ff7fe69ca755e8f665c6a3ea8143c"></a><!-- doxytag: member="vtkMINCImageReader::SafeDownCast" ref="538ff7fe69ca755e8f665c6a3ea8143c" args="(vtkObject *o)" -->
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<td class="memname">static <a class="el" href="a01044.html">vtkMINCImageReader</a>* vtkMINCImageReader::SafeDownCast </td>
<td>(</td>
<td class="paramtype"><a class="el" href="a01084.html">vtkObject</a> * </td>
<td class="paramname"> <em>o</em> </td>
<td> ) </td>
<td><code> [static]</code></td>
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<p>Reimplemented from <a class="el" href="a00815.html#28718113a1efdd794f98aba37cca18c1">vtkImageReader2</a>.</p>
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<a class="anchor" name="afc39cb112a1838ea70b340634885e97"></a><!-- doxytag: member="vtkMINCImageReader::New" ref="afc39cb112a1838ea70b340634885e97" args="()" -->
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<td class="memname">static <a class="el" href="a01044.html">vtkMINCImageReader</a>* vtkMINCImageReader::New </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [static]</code></td>
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<p>
Create an object with Debug turned off, modified time initialized to zero, and reference counting on.
<p>Reimplemented from <a class="el" href="a00815.html#25a0c83fabafbf8a658f7373ee84986b">vtkImageReader2</a>.</p>
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<a class="anchor" name="d50134f6edb88b336f6f3c239d42826e"></a><!-- doxytag: member="vtkMINCImageReader::PrintSelf" ref="d50134f6edb88b336f6f3c239d42826e" args="(ostream &os, vtkIndent indent)" -->
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<td class="memname">virtual void vtkMINCImageReader::PrintSelf </td>
<td>(</td>
<td class="paramtype">ostream & </td>
<td class="paramname"> <em>os</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype"><a class="el" href="a00869.html">vtkIndent</a> </td>
<td class="paramname"> <em>indent</em></td><td> </td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td><td><code> [virtual]</code></td>
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<p>
Methods invoked by print to print information about the object including superclasses. Typically not called by the user (use <a class="el" href="a01085.html#edadf6378465fd81c2592ef64262e2a5">Print()</a> instead) but used in the hierarchical print process to combine the output of several classes.
<p>Reimplemented from <a class="el" href="a00815.html#75a81a26827763bb51f81dbc643da687">vtkImageReader2</a>.</p>
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<a class="anchor" name="90a34b0fe21da215b73d67097093a91b"></a><!-- doxytag: member="vtkMINCImageReader::SetFileName" ref="90a34b0fe21da215b73d67097093a91b" args="(const char *name)" -->
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<td class="memname">virtual void vtkMINCImageReader::SetFileName </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"> <em>name</em> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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<p>
Set the file name.
<p>Reimplemented from <a class="el" href="a00815.html#4d5ea8f8521e941560775043236b5920">vtkImageReader2</a>.</p>
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<a class="anchor" name="944586e27cc6975287e4a1cdda955b2f"></a><!-- doxytag: member="vtkMINCImageReader::GetFileExtensions" ref="944586e27cc6975287e4a1cdda955b2f" args="()" -->
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<td class="memname">virtual const char* vtkMINCImageReader::GetFileExtensions </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [inline, virtual]</code></td>
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<p>
Get the entension for this file format.
<p>Reimplemented from <a class="el" href="a00815.html#2846943a7802b3a62df51e0936542abb">vtkImageReader2</a>.</p>
<p>Definition at line <a class="el" href="a04944.html#l00099">99</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="9c95dd27a053bbd1b554ee4289659551"></a><!-- doxytag: member="vtkMINCImageReader::GetDescriptiveName" ref="9c95dd27a053bbd1b554ee4289659551" args="()" -->
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<td class="memname">virtual const char* vtkMINCImageReader::GetDescriptiveName </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [inline, virtual]</code></td>
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<p>
Get the name of this file format.
<p>Reimplemented from <a class="el" href="a00815.html#e83ebabf18c670a314bb32eb50371f61">vtkImageReader2</a>.</p>
<p>Definition at line <a class="el" href="a04944.html#l00105">105</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="6f7c0d1075a862f8282d38f34ac504b6"></a><!-- doxytag: member="vtkMINCImageReader::CanReadFile" ref="6f7c0d1075a862f8282d38f34ac504b6" args="(const char *name)" -->
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<td class="memname">virtual int vtkMINCImageReader::CanReadFile </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"> <em>name</em> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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<p>
Test whether the specified file can be read.
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<a class="anchor" name="dbaa540e0409ff4453b615201b55f1d8"></a><!-- doxytag: member="vtkMINCImageReader::GetDirectionCosines" ref="dbaa540e0409ff4453b615201b55f1d8" args="()" -->
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<td class="memname">virtual <a class="el" href="a00998.html">vtkMatrix4x4</a>* vtkMINCImageReader::GetDirectionCosines </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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Get a matrix that describes the orientation of the data. The three columns of the matrix are the direction cosines for the x, y and z dimensions respectively.
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<a class="anchor" name="48adf79a5802e839a4209d55b8262f3a"></a><!-- doxytag: member="vtkMINCImageReader::GetRescaleSlope" ref="48adf79a5802e839a4209d55b8262f3a" args="()" -->
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<td class="memname">virtual double vtkMINCImageReader::GetRescaleSlope </td>
<td>(</td>
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<td> ) </td>
<td><code> [virtual]</code></td>
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Get the slope and intercept for rescaling the scalar values to real data values. To convert scalar values to real values, use the equation y = x*RescaleSlope + RescaleIntercept.
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<a class="anchor" name="07a8c460e695e2b591a800e32f59a78d"></a><!-- doxytag: member="vtkMINCImageReader::GetRescaleIntercept" ref="07a8c460e695e2b591a800e32f59a78d" args="()" -->
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<td class="memname">virtual double vtkMINCImageReader::GetRescaleIntercept </td>
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<td><code> [virtual]</code></td>
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<p>
Get the slope and intercept for rescaling the scalar values to real data values. To convert scalar values to real values, use the equation y = x*RescaleSlope + RescaleIntercept.
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<a class="anchor" name="2ecc97f2a2a238b437a6f57c4d057dee"></a><!-- doxytag: member="vtkMINCImageReader::SetRescaleRealValues" ref="2ecc97f2a2a238b437a6f57c4d057dee" args="(int)" -->
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<td class="memname">virtual void vtkMINCImageReader::SetRescaleRealValues </td>
<td>(</td>
<td class="paramtype">int </td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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Rescale real data values to float. If this is done, the RescaleSlope and RescaleIntercept will be set to 1 and 0 respectively. This is off by default.
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<a class="anchor" name="93803a2313d51d30b8e3824023cd80f3"></a><!-- doxytag: member="vtkMINCImageReader::RescaleRealValuesOn" ref="93803a2313d51d30b8e3824023cd80f3" args="()" -->
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<td class="memname">virtual void vtkMINCImageReader::RescaleRealValuesOn </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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<p>
Rescale real data values to float. If this is done, the RescaleSlope and RescaleIntercept will be set to 1 and 0 respectively. This is off by default.
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<a class="anchor" name="65425b84f538cb0442e531f384df1398"></a><!-- doxytag: member="vtkMINCImageReader::RescaleRealValuesOff" ref="65425b84f538cb0442e531f384df1398" args="()" -->
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<td class="memname">virtual void vtkMINCImageReader::RescaleRealValuesOff </td>
<td>(</td>
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<td> ) </td>
<td><code> [virtual]</code></td>
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<p>
Rescale real data values to float. If this is done, the RescaleSlope and RescaleIntercept will be set to 1 and 0 respectively. This is off by default.
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<a class="anchor" name="835901cbc2f3a709d2578e4f83b5b912"></a><!-- doxytag: member="vtkMINCImageReader::GetRescaleRealValues" ref="835901cbc2f3a709d2578e4f83b5b912" args="()" -->
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<td class="memname">virtual int vtkMINCImageReader::GetRescaleRealValues </td>
<td>(</td>
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<td> ) </td>
<td><code> [virtual]</code></td>
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<p>
Rescale real data values to float. If this is done, the RescaleSlope and RescaleIntercept will be set to 1 and 0 respectively. This is off by default.
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<a class="anchor" name="173caa5b2048eb51c71f6bf45d32d981"></a><!-- doxytag: member="vtkMINCImageReader::GetDataRange" ref="173caa5b2048eb51c71f6bf45d32d981" args="()" -->
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<td class="memname">virtual double* vtkMINCImageReader::GetDataRange </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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Get the scalar range of the output from the information in the file header. This is more efficient that computing the scalar range, but in some cases the MINC file stores an incorrect valid_range and the DataRange will be incorrect.
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<a class="anchor" name="f087792b766fb4a8ab51a490a7b0710d"></a><!-- doxytag: member="vtkMINCImageReader::GetDataRange" ref="f087792b766fb4a8ab51a490a7b0710d" args="(double range[2])" -->
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<td class="memname">virtual void vtkMINCImageReader::GetDataRange </td>
<td>(</td>
<td class="paramtype">double </td>
<td class="paramname"> <em>range</em>[2] </td>
<td> ) </td>
<td><code> [inline, virtual]</code></td>
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<p>
Get the scalar range of the output from the information in the file header. This is more efficient that computing the scalar range, but in some cases the MINC file stores an incorrect valid_range and the DataRange will be incorrect.
<p>Definition at line <a class="el" href="a04944.html#l00140">140</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="eaf8f7a52ecd1b68d6f95254cb3c1c4b"></a><!-- doxytag: member="vtkMINCImageReader::GetNumberOfTimeSteps" ref="eaf8f7a52ecd1b68d6f95254cb3c1c4b" args="()" -->
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<td class="memname">virtual int vtkMINCImageReader::GetNumberOfTimeSteps </td>
<td>(</td>
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<td><code> [virtual]</code></td>
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Get the number of time steps in the file.
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<a class="anchor" name="ce758c3d5dc96a54434a6042650ef22b"></a><!-- doxytag: member="vtkMINCImageReader::SetTimeStep" ref="ce758c3d5dc96a54434a6042650ef22b" args="(int)" -->
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<td class="memname">virtual void vtkMINCImageReader::SetTimeStep </td>
<td>(</td>
<td class="paramtype">int </td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [virtual]</code></td>
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Set the time step to read.
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<a class="anchor" name="707f6eba94c78ef300436694646f1903"></a><!-- doxytag: member="vtkMINCImageReader::GetTimeStep" ref="707f6eba94c78ef300436694646f1903" args="()" -->
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<td class="memname">virtual int vtkMINCImageReader::GetTimeStep </td>
<td>(</td>
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<td><code> [virtual]</code></td>
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Set the time step to read.
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<a class="anchor" name="7e7d608cce8c998b427183f988238ddb"></a><!-- doxytag: member="vtkMINCImageReader::GetImageAttributes" ref="7e7d608cce8c998b427183f988238ddb" args="()" -->
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<td class="memname">virtual <a class="el" href="a01043.html">vtkMINCImageAttributes</a>* vtkMINCImageReader::GetImageAttributes </td>
<td>(</td>
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<td><code> [virtual]</code></td>
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Get the image attributes, which contain patient information and other useful metadata.
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<a class="anchor" name="b3633de7393ce4b46011fdfae6019ec9"></a><!-- doxytag: member="vtkMINCImageReader::OpenNetCDFFile" ref="b3633de7393ce4b46011fdfae6019ec9" args="(const char *filename, int &ncid)" -->
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<td class="memname">virtual int vtkMINCImageReader::OpenNetCDFFile </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"> <em>filename</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">int & </td>
<td class="paramname"> <em>ncid</em></td><td> </td>
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<td></td>
<td>)</td>
<td></td><td></td><td><code> [protected, virtual]</code></td>
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<p>
</div>
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<a class="anchor" name="107e7f1a299edc38a74f5238d7d1d09b"></a><!-- doxytag: member="vtkMINCImageReader::CloseNetCDFFile" ref="107e7f1a299edc38a74f5238d7d1d09b" args="(int ncid)" -->
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<td class="memname">virtual int vtkMINCImageReader::CloseNetCDFFile </td>
<td>(</td>
<td class="paramtype">int </td>
<td class="paramname"> <em>ncid</em> </td>
<td> ) </td>
<td><code> [protected, virtual]</code></td>
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<a class="anchor" name="3dfa146f66f1bade6156f01ba55af9d5"></a><!-- doxytag: member="vtkMINCImageReader::IndexFromDimensionName" ref="3dfa146f66f1bade6156f01ba55af9d5" args="(const char *dimName)" -->
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<td class="memname">virtual int vtkMINCImageReader::IndexFromDimensionName </td>
<td>(</td>
<td class="paramtype">const char * </td>
<td class="paramname"> <em>dimName</em> </td>
<td> ) </td>
<td><code> [protected, virtual]</code></td>
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<p>
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<a class="anchor" name="ce49f5df8f7865cb6e49986fd2c6b340"></a><!-- doxytag: member="vtkMINCImageReader::ReadMINCFileAttributes" ref="ce49f5df8f7865cb6e49986fd2c6b340" args="()" -->
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<td class="memname">virtual int vtkMINCImageReader::ReadMINCFileAttributes </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [protected, virtual]</code></td>
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<p>
</div>
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<a class="anchor" name="ee3b84d63c57fceb4c0f957d080ca9eb"></a><!-- doxytag: member="vtkMINCImageReader::FindRangeAndRescaleValues" ref="ee3b84d63c57fceb4c0f957d080ca9eb" args="()" -->
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<td class="memname">virtual void vtkMINCImageReader::FindRangeAndRescaleValues </td>
<td>(</td>
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<td> ) </td>
<td><code> [protected, virtual]</code></td>
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<a class="anchor" name="7ea7045ea434479dec461da5c988da8d"></a><!-- doxytag: member="vtkMINCImageReader::ConvertMINCTypeToVTKType" ref="7ea7045ea434479dec461da5c988da8d" args="(int minctype, int mincsigned)" -->
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<td class="memname">static int vtkMINCImageReader::ConvertMINCTypeToVTKType </td>
<td>(</td>
<td class="paramtype">int </td>
<td class="paramname"> <em>minctype</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">int </td>
<td class="paramname"> <em>mincsigned</em></td><td> </td>
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<td></td>
<td>)</td>
<td></td><td></td><td><code> [static, protected]</code></td>
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<a class="anchor" name="a5ec39bbfbeccaf4fc7c1a4648eb891f"></a><!-- doxytag: member="vtkMINCImageReader::ExecuteInformation" ref="a5ec39bbfbeccaf4fc7c1a4648eb891f" args="()" -->
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<td class="memname">virtual void vtkMINCImageReader::ExecuteInformation </td>
<td>(</td>
<td class="paramname"> </td>
<td> ) </td>
<td><code> [protected, virtual]</code></td>
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<p>Reimplemented from <a class="el" href="a00815.html#e31d4865f47029d0a63da3716bae2305">vtkImageReader2</a>.</p>
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<a class="anchor" name="3b1ec089b4075f8fbfa6d18537e2d237"></a><!-- doxytag: member="vtkMINCImageReader::ExecuteData" ref="3b1ec089b4075f8fbfa6d18537e2d237" args="(vtkDataObject *out)" -->
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<td class="memname">virtual void vtkMINCImageReader::ExecuteData </td>
<td>(</td>
<td class="paramtype"><a class="el" href="a00362.html">vtkDataObject</a> * </td>
<td class="paramname"> <em>output</em> </td>
<td> ) </td>
<td><code> [protected, virtual]</code></td>
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This method is the old style execute method
<p>Reimplemented from <a class="el" href="a00815.html#a26f5f16dd7178bea2d7608f0d5ed633">vtkImageReader2</a>.</p>
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<hr><h2>Member Data Documentation</h2>
<a class="anchor" name="f01246e0cf19de8aadc40019c519c287"></a><!-- doxytag: member="vtkMINCImageReader::MINCImageType" ref="f01246e0cf19de8aadc40019c519c287" args="" -->
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<td class="memname">int <a class="el" href="a01044.html#f01246e0cf19de8aadc40019c519c287">vtkMINCImageReader::MINCImageType</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00162">162</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="735476e010110275467bae63626d2825"></a><!-- doxytag: member="vtkMINCImageReader::MINCImageTypeSigned" ref="735476e010110275467bae63626d2825" args="" -->
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<td class="memname">int <a class="el" href="a01044.html#735476e010110275467bae63626d2825">vtkMINCImageReader::MINCImageTypeSigned</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00163">163</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="fd5bf6c0f52d450d482be523c245e223"></a><!-- doxytag: member="vtkMINCImageReader::ValidRange" ref="fd5bf6c0f52d450d482be523c245e223" args="[2]" -->
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<td class="memname">double <a class="el" href="a01044.html#fd5bf6c0f52d450d482be523c245e223">vtkMINCImageReader::ValidRange</a>[2]<code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00165">165</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="4d0f4a7a3312ece9dd61ea7737e789fe"></a><!-- doxytag: member="vtkMINCImageReader::ImageRange" ref="4d0f4a7a3312ece9dd61ea7737e789fe" args="[2]" -->
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<td class="memname">double <a class="el" href="a01044.html#4d0f4a7a3312ece9dd61ea7737e789fe">vtkMINCImageReader::ImageRange</a>[2]<code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00166">166</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="dd68cb3659f69a0e098baa33aec1ce81"></a><!-- doxytag: member="vtkMINCImageReader::DataRange" ref="dd68cb3659f69a0e098baa33aec1ce81" args="[2]" -->
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<td class="memname">double <a class="el" href="a01044.html#dd68cb3659f69a0e098baa33aec1ce81">vtkMINCImageReader::DataRange</a>[2]<code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00167">167</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="8ee0ec8e0b2ac2d13e0602c5673fac47"></a><!-- doxytag: member="vtkMINCImageReader::NumberOfTimeSteps" ref="8ee0ec8e0b2ac2d13e0602c5673fac47" args="" -->
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<td class="memname">int <a class="el" href="a01044.html#8ee0ec8e0b2ac2d13e0602c5673fac47">vtkMINCImageReader::NumberOfTimeSteps</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00169">169</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="fdef0564d0294b5cb693999204bb4342"></a><!-- doxytag: member="vtkMINCImageReader::TimeStep" ref="fdef0564d0294b5cb693999204bb4342" args="" -->
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<td class="memname">int <a class="el" href="a01044.html#fdef0564d0294b5cb693999204bb4342">vtkMINCImageReader::TimeStep</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00170">170</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="fc7ea146a2f5ec5a3169868c9580653d"></a><!-- doxytag: member="vtkMINCImageReader::DirectionCosines" ref="fc7ea146a2f5ec5a3169868c9580653d" args="" -->
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<td class="memname"><a class="el" href="a00998.html">vtkMatrix4x4</a>* <a class="el" href="a01044.html#fc7ea146a2f5ec5a3169868c9580653d">vtkMINCImageReader::DirectionCosines</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00171">171</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="d91f6f2edaa4b1b124d33a5796a1bfe2"></a><!-- doxytag: member="vtkMINCImageReader::RescaleSlope" ref="d91f6f2edaa4b1b124d33a5796a1bfe2" args="" -->
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<td class="memname">double <a class="el" href="a01044.html#d91f6f2edaa4b1b124d33a5796a1bfe2">vtkMINCImageReader::RescaleSlope</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00172">172</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="76bd1931b448844db5684105d663ab13"></a><!-- doxytag: member="vtkMINCImageReader::RescaleIntercept" ref="76bd1931b448844db5684105d663ab13" args="" -->
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<td class="memname">double <a class="el" href="a01044.html#76bd1931b448844db5684105d663ab13">vtkMINCImageReader::RescaleIntercept</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00173">173</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="b88e31d7fa9bc139e414cacfc41c9faa"></a><!-- doxytag: member="vtkMINCImageReader::RescaleRealValues" ref="b88e31d7fa9bc139e414cacfc41c9faa" args="" -->
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<td class="memname">int <a class="el" href="a01044.html#b88e31d7fa9bc139e414cacfc41c9faa">vtkMINCImageReader::RescaleRealValues</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00174">174</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="c2aff32dc6bc45f06d71692691bd542b"></a><!-- doxytag: member="vtkMINCImageReader::ImageAttributes" ref="c2aff32dc6bc45f06d71692691bd542b" args="" -->
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<td class="memname"><a class="el" href="a01043.html">vtkMINCImageAttributes</a>* <a class="el" href="a01044.html#c2aff32dc6bc45f06d71692691bd542b">vtkMINCImageReader::ImageAttributes</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00175">175</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<a class="anchor" name="7ed307c7c5325990088769afee35cdff"></a><!-- doxytag: member="vtkMINCImageReader::FileNameHasChanged" ref="7ed307c7c5325990088769afee35cdff" args="" -->
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<td class="memname">int <a class="el" href="a01044.html#7ed307c7c5325990088769afee35cdff">vtkMINCImageReader::FileNameHasChanged</a><code> [protected]</code> </td>
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<p>Definition at line <a class="el" href="a04944.html#l00177">177</a> of file <a class="el" href="a04944.html">vtkMINCImageReader.h</a>.</p>
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<hr>The documentation for this class was generated from the following file:<ul>
<li>dox/IO/<a class="el" href="a04944.html">vtkMINCImageReader.h</a></ul>
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<hr size="1"><address style="text-align: right;"><small>Generated on Wed Jun 3 19:18:32 2009 for VTK by
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<img src="doxygen.png" alt="doxygen" align="middle" border="0"></a> 1.5.6 </small></address>
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