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<h1>itkBioCellBase.h</h1><a href="itkBioCellBase_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkBioCellBase.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2008-10-20 21:28:20 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.7 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even</span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR</span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkBioCellBase_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkBioCellBase_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkRGBPixel_8h.html">itkRGBPixel.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkVector_8h.html">itkVector.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkPoint_8h.html">itkPoint.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkBioGenome_8h.html">itkBioGenome.h</a>"</span>
<a name="l00024"></a>00024
<a name="l00025"></a>00025 <span class="keyword">namespace </span>itk {
<a name="l00026"></a>00026
<a name="l00027"></a>00027 <span class="keyword">namespace </span>bio {
<a name="l00028"></a>00028
<a name="l00033"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html">00033</a> <span class="keyword">class </span><a class="code" href="classitk_1_1bio_1_1CellBase.html" title="non-templated Base class from which the templated Cell classes will be derived. Derived...">CellBase</a>
<a name="l00034"></a>00034 {
<a name="l00035"></a>00035 <span class="keyword">public</span>:
<a name="l00036"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#94d4b753a1a02ed691b5ef9c2c632049">00036</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1RGBPixel.html">itk::RGBPixel<float></a> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a>;
<a name="l00037"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#68b7ea1a3ea62bbd264201bac5ba7c18">00037</a> <span class="keyword">typedef</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#68b7ea1a3ea62bbd264201bac5ba7c18">IdentifierType</a>;
<a name="l00038"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#8839c0a155a4bc6e9a72a5bda129b105">00038</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1bio_1_1Genome.html" title="This class implement the abstraction of a biological genome.">itk::bio::Genome</a> <a class="code" href="classitk_1_1bio_1_1Genome.html" title="This class implement the abstraction of a biological genome.">GenomeType</a>;
<a name="l00039"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">00039</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1bio_1_1Genome.html#1e49fc43aeb7fbbacca8c4c17642d10d">GenomeType::GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a>;
<a name="l00040"></a>00040
<a name="l00041"></a>00041
<a name="l00042"></a>00042 <span class="keyword">virtual</span> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#c76cfd0fb800ff5f4647ce1636d4f22c">GetColor</a>(<span class="keywordtype">void</span>) <span class="keyword">const</span>;
<a name="l00043"></a>00043
<a name="l00044"></a>00044 <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#87cd784a671d5b97271d2e94ff1540b9">GetRadius</a>(<span class="keywordtype">void</span>) <span class="keyword">const</span>;
<a name="l00045"></a>00045
<a name="l00046"></a>00046 <a class="code" href="classitk_1_1bio_1_1CellBase.html#68b7ea1a3ea62bbd264201bac5ba7c18">IdentifierType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#6ac1ba14e4828cb8f633bb3391a2b131">GetSelfIdentifier</a>(<span class="keywordtype">void</span>) <span class="keyword">const</span>;
<a name="l00047"></a>00047 <a class="code" href="classitk_1_1bio_1_1CellBase.html#68b7ea1a3ea62bbd264201bac5ba7c18">IdentifierType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#59366e498b86a01ec41a61b411b88c3f">GetParentIdentifier</a>(<span class="keywordtype">void</span>) <span class="keyword">const</span>;
<a name="l00048"></a>00048
<a name="l00049"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b">00049</a> <span class="keyword">enum</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b">CellCycleState</a> {
<a name="l00050"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bd9b10959fd9c025b6516821fc5729940">00050</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bd9b10959fd9c025b6516821fc5729940">M</a> = 1UL,
<a name="l00051"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b25d660a4689b049051c61c415e7165f6">00051</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b25d660a4689b049051c61c415e7165f6">Gap1</a>,
<a name="l00052"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b813fd152a33d07f7531e945c9db2c579">00052</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b813fd152a33d07f7531e945c9db2c579">S</a>,
<a name="l00053"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bf1648480874bf2cae7b4a87c1c771040">00053</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bf1648480874bf2cae7b4a87c1c771040">Gap2</a>,
<a name="l00054"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bcce7a4aa6ab840032b2de421a126e9c7">00054</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bcce7a4aa6ab840032b2de421a126e9c7">Gap0</a>,
<a name="l00055"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bfb91dda6280e7d93f13bc57b26ed28aa">00055</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0bfb91dda6280e7d93f13bc57b26ed28aa">Apop</a>
<a name="l00056"></a>00056 };
<a name="l00057"></a>00057
<a name="l00058"></a>00058 <span class="keyword">protected</span>:
<a name="l00059"></a>00059 <a class="code" href="classitk_1_1bio_1_1CellBase.html#82cfffbf78a856433774ebc33024d6e8">CellBase</a>();
<a name="l00060"></a>00060 <span class="keyword">virtual</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#15fcbc811e3a737db029421f779f0baa">~CellBase</a>();
<a name="l00061"></a>00061
<a name="l00062"></a>00062 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#fe0258b5236279ba48fa705659cb280e">Grow</a>(<span class="keywordtype">void</span>);
<a name="l00063"></a>00063 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#8930e2764df250cd4e42efa1c857dc2e">DNAReplication</a>(<span class="keywordtype">void</span>);
<a name="l00064"></a>00064 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#4321e11d045ad98083738592211233b1">Apoptosis</a>(<span class="keywordtype">void</span>);
<a name="l00065"></a>00065
<a name="l00066"></a>00066 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#f510dffec25bb269f8956bba0a3044c3">EnergyIntake</a>(<span class="keywordtype">void</span>);
<a name="l00067"></a>00067 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#ae29444bc72e67a4bcd6ddb29cca381a">NutrientsIntake</a>(<span class="keywordtype">void</span>);
<a name="l00068"></a>00068 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#09d46b288cf30562bb811735d36c1dc7">ComputeGeneNetwork</a>(<span class="keywordtype">void</span>);
<a name="l00069"></a>00069 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#a191be5599cd4ddc358939013ca02006">SecreteProducts</a>(<span class="keywordtype">void</span>);
<a name="l00070"></a>00070
<a name="l00071"></a>00071 <span class="keyword">virtual</span> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#2642f15b7a233c929ae7d7c5024e3724">CheckPointGrowth</a>(<span class="keywordtype">void</span>);
<a name="l00072"></a>00072 <span class="keyword">virtual</span> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#5029e341ac6c7db3c89b6884d1ce63b0">CheckPointDNAReplication</a>(<span class="keywordtype">void</span>);
<a name="l00073"></a>00073 <span class="keyword">virtual</span> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#e1b431ffd8a89af9b32f57efabed2dc0">CheckPointMitosis</a>(<span class="keywordtype">void</span>);
<a name="l00074"></a>00074 <span class="keyword">virtual</span> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#2dd7dc556aea452123678b8130020dfc">CheckPointApoptosis</a>(<span class="keywordtype">void</span>);
<a name="l00075"></a>00075
<a name="l00076"></a>00076 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#122d7ffd9aafda8b8204b9bb6512fc86">MarkForRemoval</a>(<span class="keywordtype">void</span>);
<a name="l00077"></a>00077
<a name="l00078"></a>00078 <span class="comment">// Static Members</span>
<a name="l00079"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#d28464a4fc76b96a72d522880e809c3f">00079</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#d28464a4fc76b96a72d522880e809c3f">DefaultColor</a>;
<a name="l00080"></a>00080
<a name="l00081"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#ea42ed1ab72cde9648503dc69e313eb4">00081</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#ea42ed1ab72cde9648503dc69e313eb4">BlueGene</a>; <span class="comment">// Pigment genes</span>
<a name="l00082"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#7611dd53cc2f5aac0fad910e456bc188">00082</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#7611dd53cc2f5aac0fad910e456bc188">RedGene</a>;
<a name="l00083"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#300a1b9730a2bd956ca549852e84b044">00083</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#300a1b9730a2bd956ca549852e84b044">GreenGene</a>;
<a name="l00084"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#437d46c6c9afc296a1ff62bf41f2a94c">00084</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#437d46c6c9afc296a1ff62bf41f2a94c">Cdk2E</a>; <span class="comment">// cell cycle control genes</span>
<a name="l00085"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#4911444aabc7c92a1a827b8e503bb18e">00085</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#4911444aabc7c92a1a827b8e503bb18e">Caspase</a>; <span class="comment">// cleavage enzyme: apoptosis effector</span>
<a name="l00086"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#3c5d1e4e4628888cc87592c6bf31e4eb">00086</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0502c56b1ff9c052db1ed0b0426d49a4">GeneIdType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#3c5d1e4e4628888cc87592c6bf31e4eb">Pressurin</a>; <span class="comment">// signal from micro-tubules subject to stress</span>
<a name="l00087"></a>00087
<a name="l00088"></a>00088
<a name="l00089"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#3d6771baafd40e8c99c6984f0d283e3d">00089</a> <span class="keyword">static</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#3d6771baafd40e8c99c6984f0d283e3d">MaximumGenerationLimit</a>;
<a name="l00090"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#bc9209f264f2f9320614a3112f1f446d">00090</a> <span class="keyword">static</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#bc9209f264f2f9320614a3112f1f446d">GrowthMaximumLatencyTime</a>;
<a name="l00091"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#4135840a7bfafaac69164a19a40f3b25">00091</a> <span class="keyword">static</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#4135840a7bfafaac69164a19a40f3b25">DivisionMaximumLatencyTime</a>;
<a name="l00092"></a>00092
<a name="l00093"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#834388992c6a24cefa6b15ae281e963b">00093</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#834388992c6a24cefa6b15ae281e963b">EnergySelfRepairLevel</a>;
<a name="l00094"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#e2efe6db3c7b96d1049d371453711178">00094</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#e2efe6db3c7b96d1049d371453711178">NutrientSelfRepairLevel</a>;
<a name="l00095"></a>00095
<a name="l00096"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#4b87e8a553b1f362e30eb5cb10f965c7">00096</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#4b87e8a553b1f362e30eb5cb10f965c7">DefaultEnergyIntake</a>;
<a name="l00097"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#ca9ec3d7607ad347e1afdaaa04ef61f7">00097</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#ca9ec3d7607ad347e1afdaaa04ef61f7">DefaultNutrientsIntake</a>;
<a name="l00098"></a>00098
<a name="l00099"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#1d91c0df523bb664a54e7a01983805fa">00099</a> <span class="keyword">static</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#1d91c0df523bb664a54e7a01983805fa">Counter</a>;
<a name="l00100"></a>00100
<a name="l00101"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#944a710826263d72b771547eb1447dac">00101</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#944a710826263d72b771547eb1447dac">WellNourishedColor</a>;
<a name="l00102"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#916f8f19d32c0e0c9b8bf86d4f1177dd">00102</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#916f8f19d32c0e0c9b8bf86d4f1177dd">HopefullColor</a>;
<a name="l00103"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#713cbcc732cfc6fb87c781a59382d913">00103</a> <span class="keyword">static</span> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#713cbcc732cfc6fb87c781a59382d913">StarvingColor</a>;
<a name="l00104"></a>00104
<a name="l00105"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#57c009ba375ac7545834735907e83f59">00105</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#57c009ba375ac7545834735907e83f59">ChemoAttractantLowThreshold</a>;
<a name="l00106"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#6c5d4e58d3043d80b77371e948a038f2">00106</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#6c5d4e58d3043d80b77371e948a038f2">ChemoAttractantHighThreshold</a>;
<a name="l00107"></a>00107
<a name="l00108"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0f5cbab7d801c58178fe8ba7c8d012af">00108</a> <a class="code" href="classitk_1_1bio_1_1Genome.html" title="This class implement the abstraction of a biological genome.">GenomeType</a> * <a class="code" href="classitk_1_1bio_1_1CellBase.html#0f5cbab7d801c58178fe8ba7c8d012af">m_Genome</a>;
<a name="l00109"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#17a764822bc854c383bf3b5f50afeb6b">00109</a> <a class="code" href="classitk_1_1bio_1_1Genome.html" title="This class implement the abstraction of a biological genome.">GenomeType</a> * <a class="code" href="classitk_1_1bio_1_1CellBase.html#17a764822bc854c383bf3b5f50afeb6b">m_GenomeCopy</a>;
<a name="l00110"></a>00110
<a name="l00111"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#00803a205411323ba11d0ee80e1f326c">00111</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#00803a205411323ba11d0ee80e1f326c">DefaultRadius</a>;
<a name="l00112"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#465ba26c37a57f3e9f83d92634680ba4">00112</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#465ba26c37a57f3e9f83d92634680ba4">GrowthRadiusLimit</a>;
<a name="l00113"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#325ca19ddf17e971073921c15e8deb74">00113</a> <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#325ca19ddf17e971073921c15e8deb74">GrowthRadiusIncrement</a>;
<a name="l00114"></a>00114
<a name="l00115"></a>00115 <span class="keyword">public</span>:
<a name="l00116"></a>00116
<a name="l00117"></a>00117 <span class="keyword">virtual</span> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#66f89eadbf482988b488070b01d2a09e">MarkedForRemoval</a>(<span class="keywordtype">void</span>) <span class="keyword">const</span>;
<a name="l00118"></a>00118
<a name="l00119"></a>00119
<a name="l00120"></a>00120 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#c3e824053d1e0f0bbb5b78f402c5f012">SetDefaultRadius</a>( <span class="keywordtype">double</span> );
<a name="l00121"></a>00121 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#492f2670aeb1f1e85d8adfa83245949b">SetGrowthRadiusLimit</a>( <span class="keywordtype">double</span> );
<a name="l00122"></a>00122 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#4553e6a8847e3b8b6f73fbcc7d34383b">SetGrowthRadiusIncrement</a>( <span class="keywordtype">double</span> );
<a name="l00123"></a>00123 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#2419bc9854fefeddeed610344632015c">SetEnergySelfRepairLevel</a>( <span class="keywordtype">double</span> );
<a name="l00124"></a>00124 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#42c48de555aa23fe5144c300dba4696b">SetNutrientSelfRepairLevel</a>( <span class="keywordtype">double</span> );
<a name="l00125"></a>00125 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#f529e3bab09cc303239b979cc47281e7">SetDefaultColor</a>( <span class="keyword">const</span> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> & color );
<a name="l00126"></a>00126
<a name="l00127"></a>00127 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#02129ac0986df99ee9ff2be7c4ef56b4">SetChemoAttractantHighThreshold</a>( <span class="keywordtype">double</span> );
<a name="l00128"></a>00128 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#3c0d00de02220548cd7746888da390ce">SetChemoAttractantLowThreshold</a>( <span class="keywordtype">double</span> );
<a name="l00129"></a>00129
<a name="l00130"></a>00130 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#8afd0f3f3c76e09653d268495f8f7195">SetGrowthMaximumLatencyTime</a>( <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> latency );
<a name="l00131"></a>00131 <span class="keyword">static</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#9811939d6335cf02f3d3286d0b6b3f84">GetGrowthMaximumLatencyTime</a>( <span class="keywordtype">void</span> );
<a name="l00132"></a>00132
<a name="l00133"></a>00133 <span class="keyword">static</span> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#7e1c3d0d6cd0d97c1e952816d10e2700">GetGrowthRadiusLimit</a>( <span class="keywordtype">void</span> );
<a name="l00134"></a>00134 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#5fa86e6659cede0899894164b6719a36">SetMaximumGenerationLimit</a>( <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> );
<a name="l00135"></a>00135
<a name="l00136"></a>00136 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#bd62a56400d4713488557c2757f4b9ad">SetDivisionMaximumLatencyTime</a>( <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> );
<a name="l00137"></a>00137 <span class="keyword">static</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#028da68617253d2e4af8c1692dc49c2b">GetDivisionMaximumLatencyTime</a>(<span class="keywordtype">void</span>);
<a name="l00138"></a>00138
<a name="l00139"></a>00139 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#347aa4e106710af2adb358ace2c9fe32">ResetCounter</a>(<span class="keywordtype">void</span>);
<a name="l00140"></a>00140 <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#413942058649183f16e43583251031bc">Initialize</a>(<span class="keywordtype">void</span>); <span class="comment">// define values in static variables.</span>
<a name="l00141"></a>00141
<a name="l00142"></a>00142
<a name="l00143"></a>00143 <span class="keyword">protected</span>:
<a name="l00144"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#26a358363eb088c2c11eff19f58e8914">00144</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#26a358363eb088c2c11eff19f58e8914">m_Pressure</a>;
<a name="l00145"></a>00145
<a name="l00146"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#15f5e020ac1986fd4d5c826a9c351d66">00146</a> <a class="code" href="classitk_1_1RGBPixel.html" title="Represent Red, Green and Blue component for color images.">ColorType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#15f5e020ac1986fd4d5c826a9c351d66">m_Color</a>;
<a name="l00147"></a>00147
<a name="l00148"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#0877cfbb0ca942f9aa5b0a524fcfac9c">00148</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0877cfbb0ca942f9aa5b0a524fcfac9c">m_Radius</a>;
<a name="l00149"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#dcc499bdb433bcd070f51c19ee6dcded">00149</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#dcc499bdb433bcd070f51c19ee6dcded">m_EnergyReserveLevel</a>;
<a name="l00150"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#f1116204cd0db45a58ade54fdbeb226d">00150</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#f1116204cd0db45a58ade54fdbeb226d">m_NutrientsReserveLevel</a>;
<a name="l00151"></a>00151
<a name="l00152"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#62c735e28a173b0b4877296167864512">00152</a> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#62c735e28a173b0b4877296167864512">m_GrowthLatencyTime</a>;
<a name="l00153"></a>00153
<a name="l00154"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#68b57441446a923eb0c19c6582d94041">00154</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#68b7ea1a3ea62bbd264201bac5ba7c18">IdentifierType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#68b57441446a923eb0c19c6582d94041">m_ParentIdentifier</a>;
<a name="l00155"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#eb335c4c144040ac00fed79b84f0591e">00155</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#68b7ea1a3ea62bbd264201bac5ba7c18">IdentifierType</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#eb335c4c144040ac00fed79b84f0591e">m_SelfIdentifier</a>;
<a name="l00156"></a>00156
<a name="l00157"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#43fa10fcb96da54ffb4123ba4882db9f">00157</a> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#43fa10fcb96da54ffb4123ba4882db9f">m_Generation</a>;
<a name="l00158"></a>00158
<a name="l00159"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#c24cd2f5eb0977498f2e1b5f8ad26bf5">00159</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#0ac145c945712fa07cce6dc0a1762b0b">CellCycleState</a> <a class="code" href="classitk_1_1bio_1_1CellBase.html#c24cd2f5eb0977498f2e1b5f8ad26bf5">m_CycleState</a>;
<a name="l00160"></a>00160
<a name="l00161"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#e3f998ea10259b0afb30ab6243595cee">00161</a> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#e3f998ea10259b0afb30ab6243595cee">m_MarkedForRemoval</a>;
<a name="l00162"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#69e9b8b6c3e9103b5812fa21d2528f4a">00162</a> <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#69e9b8b6c3e9103b5812fa21d2528f4a">m_DivisionLatencyTime</a>;
<a name="l00163"></a>00163
<a name="l00164"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#d1d87e48f5115326e0abbea5d2330c8b">00164</a> <span class="keywordtype">bool</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#d1d87e48f5115326e0abbea5d2330c8b">m_ScheduleApoptosis</a>;
<a name="l00165"></a><a class="code" href="classitk_1_1bio_1_1CellBase.html#533fa5382501749aeff2ce62e107aee6">00165</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1bio_1_1CellBase.html#533fa5382501749aeff2ce62e107aee6">m_ChemoAttractantLevel</a>;
<a name="l00166"></a>00166
<a name="l00167"></a>00167 };
<a name="l00168"></a>00168
<a name="l00169"></a>00169 } <span class="comment">// end namespace bio</span>
<a name="l00170"></a>00170
<a name="l00171"></a>00171 } <span class="comment">// end namespace itk</span>
<a name="l00172"></a>00172
<a name="l00173"></a>00173
<a name="l00174"></a>00174 <span class="preprocessor">#endif</span>
<a name="l00175"></a>00175 <span class="preprocessor"></span>
</pre></div></div>
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