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<h1>itkCoreAtomImageToDistanceMatrixProcess.h</h1><a href="itkCoreAtomImageToDistanceMatrixProcess_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkCoreAtomImageToDistanceMatrixProcess.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2008-08-04 15:56:22 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.6 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkCoreAtomImageToDistanceMatrixProcess_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkCoreAtomImageToDistanceMatrixProcess_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkBloxCoreAtomImage_8h.html">itkBloxCoreAtomImage.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkBloxCoreAtomPixel_8h.html">itkBloxCoreAtomPixel.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkDataObject_8h.html">itkDataObject.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkImage_8h.html">itkImage.h</a>"</span>
<a name="l00024"></a>00024 <span class="preprocessor">#include "<a class="code" href="itkMatrixResizeableDataObject_8h.html">itkMatrixResizeableDataObject.h</a>"</span>
<a name="l00025"></a>00025 <span class="preprocessor">#include "<a class="code" href="itkProcessObject_8h.html">itkProcessObject.h</a>"</span>
<a name="l00026"></a>00026 <span class="preprocessor">#include "vnl/vnl_matrix.h"</span>
<a name="l00027"></a>00027
<a name="l00028"></a>00028 <span class="keyword">namespace </span>itk
<a name="l00029"></a>00029 {
<a name="l00030"></a>00030
<a name="l00037"></a>00037 <span class="keyword">template</span>< <span class="keyword">typename</span> TSourceImage >
<a name="l00038"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html">00038</a> <span class="keyword">class </span><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html" title="Computes the distance between all medial nodes (voted core atoms) in a core atom...">CoreAtomImageToDistanceMatrixProcess</a> : <span class="keyword">public</span> <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">ProcessObject</a>
<a name="l00039"></a>00039 {
<a name="l00040"></a>00040 <span class="keyword">public</span>:
<a name="l00042"></a>00042 <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#3e485831c84bb7ed171836f68d56a175">itkStaticConstMacro</a>(NDimensions, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>, TSourceImage::ImageDimension);
<a name="l00043"></a>00043
<a name="l00045"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#b7ed9e527521aa78e3003b015f9e4da2">00045</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html" title="Computes the distance between all medial nodes (voted core atoms) in a core atom...">CoreAtomImageToDistanceMatrixProcess</a> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html" title="Computes the distance between all medial nodes (voted core atoms) in a core atom...">Self</a>;
<a name="l00046"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#7e117d905cda0489b46ee137f7a2ee4a">00046</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">ProcessObject</a> <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">Superclass</a>;
<a name="l00047"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#950f1e0fec0eb5a61ad2db5e6ef727fb">00047</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<Self></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00048"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#bcf9b61dbfceefde3ad9bb1cc72d7c1d">00048</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<const Self></a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00049"></a>00049
<a name="l00051"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#ef879eec5c8ab48488646c26b5938196">00051</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">DataObject::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">DataObjectPointer</a>;
<a name="l00052"></a>00052
<a name="l00054"></a>00054 <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html" title="Computes the distance between all medial nodes (voted core atoms) in a core atom...">Self</a>);
<a name="l00055"></a>00055
<a name="l00057"></a>00057 <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html" title="Computes the distance between all medial nodes (voted core atoms) in a core atom...">CoreAtomImageToDistanceMatrixProcess</a>, <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">ProcessObject</a>);
<a name="l00058"></a>00058
<a name="l00059"></a>00059 <span class="comment">//Get macro for m_NumNodes</span>
<a name="l00060"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#a85bc793e088cca8d77931b0f8c3f786">00060</a> <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(NumberOfNodes, <span class="keywordtype">int</span>);
<a name="l00061"></a>00061
<a name="l00063"></a>00063 <span class="keyword">typedef</span> TSourceImage <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#a85bc793e088cca8d77931b0f8c3f786">CoreAtomImageType</a>;
<a name="l00064"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#9489adb690485ee302ac3fbce19e13e6">00064</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">CoreAtomImageType::Pointer</a> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#9489adb690485ee302ac3fbce19e13e6">CoreAtomImagePointer</a>;
<a name="l00065"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#ff30a7278fb8896d3d9f568577fe0ffb">00065</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ed8c4a40607d317c666eb96ea265e126">CoreAtomImageType::RegionType</a> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#ff30a7278fb8896d3d9f568577fe0ffb">CoreAtomImageRegionType</a>;
<a name="l00066"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#4645cf3714a814a0112e32da1e7f7f70">00066</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> CoreAtomImageType::PixelType <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#4645cf3714a814a0112e32da1e7f7f70">CoreAtomImagePixelType</a>;
<a name="l00067"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#c50b53bbfa8d6b85610b5f8db5510c31">00067</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#68fafcc6909430ccd70cbc4aeee0107c">CoreAtomImageType::ConstPointer</a> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#c50b53bbfa8d6b85610b5f8db5510c31">CoreAtomImageConstPointer</a>;
<a name="l00068"></a>00068
<a name="l00070"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#3c497af8385021c4f0b1298ecc3c5e36">00070</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">MatrixResizeableDataObject<double></a> <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">DistanceMatrixType</a>;
<a name="l00071"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#4cc5807351ff1d6c39088958144b617b">00071</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">DistanceMatrixType::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">DistanceMatrixPointer</a>;
<a name="l00072"></a>00072
<a name="l00073"></a>00073 <span class="comment">//MedialNode typedef</span>
<a name="l00074"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#9490d1434f0e1930bc147c580f4fd18d">00074</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1BloxCoreAtomPixel.html" title="Holds a linked list of itk::BloxCoreAtomItem&#39;s.">BloxCoreAtomPixel<itkGetStaticConstMacro(NDimensions)></a> <a class="code" href="classitk_1_1BloxCoreAtomPixel.html" title="Holds a linked list of itk::BloxCoreAtomItem&#39;s.">MedialNodeType</a>;
<a name="l00075"></a>00075
<a name="l00077"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#c196688ac5e538828cba8bc5b606004b">00077</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">Point<double, itkGetStaticConstMacro(NDimensions)></a> <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">PositionType</a>;
<a name="l00078"></a>00078
<a name="l00080"></a>00080 <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">DistanceMatrixType</a> * <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#4bd74e3edee9dbf74bccc158c2ed912b">GetOutput</a>(<span class="keywordtype">void</span>);
<a name="l00081"></a>00081 <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">DistanceMatrixType</a> * <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#4bd74e3edee9dbf74bccc158c2ed912b">GetOutput</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> idx);
<a name="l00083"></a>00083
<a name="l00085"></a>00085 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#08f9d4f9a5821a13396b350c2cc0b035">SetInput1</a>( <span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#a85bc793e088cca8d77931b0f8c3f786">CoreAtomImageType</a> * CoreAtomImageA );
<a name="l00086"></a>00086
<a name="l00087"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#b778d4ae803b7f0ad4e9aacfc732ac49">00087</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#b778d4ae803b7f0ad4e9aacfc732ac49">Update</a>() {this-><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#f66b499d098a7d31b4813fe1b25c902e">GenerateData</a>();}
<a name="l00088"></a>00088
<a name="l00089"></a>00089 <span class="keyword">virtual</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#ef879eec5c8ab48488646c26b5938196">DataObjectPointer</a> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#f0e7a75a8f85b00fd81ad38251902fd0">MakeOutput</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> idx);
<a name="l00090"></a>00090
<a name="l00091"></a>00091 <span class="keyword">protected</span>:
<a name="l00092"></a>00092 <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#10955907d56513989989b20c31a38bc2">CoreAtomImageToDistanceMatrixProcess</a>();
<a name="l00093"></a><a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#fa6972a953642eac0c2e843fc63c6415">00093</a> <span class="keyword">virtual</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#fa6972a953642eac0c2e843fc63c6415">~CoreAtomImageToDistanceMatrixProcess</a>(){}
<a name="l00094"></a>00094
<a name="l00095"></a>00095 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#e010b6023c61695ca2fe812c08ca9e78">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00096"></a>00096
<a name="l00098"></a>00098 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#f66b499d098a7d31b4813fe1b25c902e">GenerateData</a>();
<a name="l00099"></a>00099
<a name="l00101"></a>00101 TSourceImage * <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#6dc6a22e7cc148b69dec13bf8379dc22">GetInput1</a>();
<a name="l00102"></a>00102
<a name="l00103"></a>00103 <span class="keyword">private</span>:
<a name="l00104"></a>00104 <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#10955907d56513989989b20c31a38bc2">CoreAtomImageToDistanceMatrixProcess</a>(<span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#b7ed9e527521aa78e3003b015f9e4da2">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00105"></a>00105 <span class="keywordtype">void</span> operator=(<span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#b7ed9e527521aa78e3003b015f9e4da2">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00106"></a>00106
<a name="l00107"></a>00107 <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#9489adb690485ee302ac3fbce19e13e6">CoreAtomImagePointer</a> m_CoreAtomImage;
<a name="l00108"></a>00108 <a class="code" href="classitk_1_1CoreAtomImageToDistanceMatrixProcess.html#4cc5807351ff1d6c39088958144b617b">DistanceMatrixPointer</a> m_DistanceMatrix;
<a name="l00109"></a>00109
<a name="l00110"></a>00110 <span class="keywordtype">int</span> m_NumberOfNodes;
<a name="l00111"></a>00111 };
<a name="l00112"></a>00112
<a name="l00113"></a>00113 } <span class="comment">// end namespace itk</span>
<a name="l00114"></a>00114
<a name="l00115"></a>00115 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00116"></a>00116 <span class="preprocessor"></span><span class="preprocessor">#include "itkCoreAtomImageToDistanceMatrixProcess.txx"</span>
<a name="l00117"></a>00117 <span class="preprocessor">#endif</span>
<a name="l00118"></a>00118 <span class="preprocessor"></span>
<a name="l00119"></a>00119 <span class="preprocessor">#endif</span>
<a name="l00120"></a>00120 <span class="preprocessor"></span>
</pre></div></div>
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