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<h1>itkCoreAtomImageToUnaryCorrespondenceMatrixProcess.h</h1><a href="itkCoreAtomImageToUnaryCorrespondenceMatrixProcess_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkCoreAtomImageToUnaryCorrespondenceMatrixProcess.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2008-10-23 16:15:23 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.4 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkCoreAtomImageToUnaryCorrespondenceMatrixProcess_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkCoreAtomImageToUnaryCorrespondenceMatrixProcess_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkImage_8h.html">itkImage.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkProcessObject_8h.html">itkProcessObject.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkDataObject_8h.html">itkDataObject.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "vnl/vnl_matrix.h"</span>
<a name="l00024"></a>00024 <span class="preprocessor">#include "<a class="code" href="itkBloxCoreAtomImage_8h.html">itkBloxCoreAtomImage.h</a>"</span>
<a name="l00025"></a>00025 <span class="preprocessor">#include "<a class="code" href="itkBloxCoreAtomPixel_8h.html">itkBloxCoreAtomPixel.h</a>"</span>
<a name="l00026"></a>00026 <span class="preprocessor">#include "<a class="code" href="itkMatrixResizeableDataObject_8h.html">itkMatrixResizeableDataObject.h</a>"</span>
<a name="l00027"></a>00027 <span class="preprocessor">#include "<a class="code" href="itkUnaryMedialNodeMetric_8h.html">itkUnaryMedialNodeMetric.h</a>"</span>
<a name="l00028"></a>00028 <span class="preprocessor">#include "<a class="code" href="itkImageFileWriter_8h.html">itkImageFileWriter.h</a>"</span>
<a name="l00029"></a>00029 <span class="preprocessor">#include "<a class="code" href="itkPNGImageIO_8h.html">itkPNGImageIO.h</a>"</span>
<a name="l00030"></a>00030
<a name="l00031"></a>00031 <span class="keyword">namespace </span>itk
<a name="l00032"></a>00032 {
<a name="l00033"></a>00033
<a name="l00042"></a>00042 <span class="keyword">template</span>< <span class="keyword">typename</span> TSourceImage >
<a name="l00043"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html">00043</a> <span class="keyword">class </span><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html" title="This process takes in two itkBloxCoreAtomImages and runs the itkUnaryMedialNodeMetric...">CoreAtomImageToUnaryCorrespondenceMatrixProcess</a> : <span class="keyword">public</span> <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">ProcessObject</a>
<a name="l00044"></a>00044 {
<a name="l00045"></a>00045 <span class="keyword">public</span>:
<a name="l00047"></a>00047 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#271303ec5dfc5870566b2b004b576367">itkStaticConstMacro</a>(NDimensions, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>, TSourceImage::ImageDimension);
<a name="l00048"></a>00048
<a name="l00050"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#e4204aed042f7772e79c1eab96d3ce38">00050</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html" title="This process takes in two itkBloxCoreAtomImages and runs the itkUnaryMedialNodeMetric...">CoreAtomImageToUnaryCorrespondenceMatrixProcess</a> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html" title="This process takes in two itkBloxCoreAtomImages and runs the itkUnaryMedialNodeMetric...">Self</a>;
<a name="l00051"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#5db959c1e8c2bf83f1b2e118f9264b14">00051</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">ProcessObject</a> <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">Superclass</a>;
<a name="l00052"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#94bd74969824d38db397e57aa1ae7b76">00052</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<Self></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00053"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#1a5a19edb092cef8e8a513644811896f">00053</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<const Self></a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00054"></a>00054
<a name="l00056"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#260489ad2533518e312cb5210a1244d0">00056</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">DataObject::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">DataObjectPointer</a>;
<a name="l00057"></a>00057
<a name="l00059"></a>00059 <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html" title="This process takes in two itkBloxCoreAtomImages and runs the itkUnaryMedialNodeMetric...">Self</a>);
<a name="l00060"></a>00060
<a name="l00062"></a>00062 <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html" title="This process takes in two itkBloxCoreAtomImages and runs the itkUnaryMedialNodeMetric...">CoreAtomImageToUnaryCorrespondenceMatrixProcess</a>, <a class="code" href="classitk_1_1ProcessObject.html" title="ProcessObject is the base class for all process objects (source, filters, mappers)...">ProcessObject</a>);
<a name="l00063"></a>00063
<a name="l00065"></a>00065 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Rows, <span class="keywordtype">int</span>);
<a name="l00066"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#4e7ec446ca77ef50dcea87ddb4c793b9">00066</a> <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Columns, <span class="keywordtype">int</span>);
<a name="l00068"></a>00068
<a name="l00070"></a>00070 <span class="keyword">typedef</span> TSourceImage <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#4e7ec446ca77ef50dcea87ddb4c793b9">CoreAtomImageType</a>;
<a name="l00071"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#377c30a0bd66795fbadcb1d9e1818d0a">00071</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">CoreAtomImageType::Pointer</a> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#377c30a0bd66795fbadcb1d9e1818d0a">CoreAtomImagePointer</a>;
<a name="l00072"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#ee0d856e2a1b77bc3ed2fcaee224e475">00072</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ed8c4a40607d317c666eb96ea265e126">CoreAtomImageType::RegionType</a> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#ee0d856e2a1b77bc3ed2fcaee224e475">CoreAtomImageRegionType</a>;
<a name="l00073"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#c3b9888c7393046373b65098728e7b25">00073</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> CoreAtomImageType::PixelType <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#c3b9888c7393046373b65098728e7b25">CoreAtomImagePixelType</a>;
<a name="l00074"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#2869e65650f72c1ab93debb304059777">00074</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#68fafcc6909430ccd70cbc4aeee0107c">CoreAtomImageType::ConstPointer</a> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#2869e65650f72c1ab93debb304059777">CoreAtomImageConstPointer</a>;
<a name="l00075"></a>00075
<a name="l00077"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#a5083d340f9ea7b82d0ac14a6bf645dc">00077</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">MatrixResizeableDataObject<double></a> <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">CorrespondenceMatrixType</a>;
<a name="l00078"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#13856729d69e48424a70d3b52f5a9e5a">00078</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">CorrespondenceMatrixType::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">CorrespondenceMatrixPointer</a>;
<a name="l00079"></a>00079
<a name="l00081"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#9cb4189cc0087d1f731c57e9556228d9">00081</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1BloxCoreAtomPixel.html" title="Holds a linked list of itk::BloxCoreAtomItem&#39;s.">BloxCoreAtomPixel<itkGetStaticConstMacro(NDimensions)></a> <a class="code" href="classitk_1_1BloxCoreAtomPixel.html" title="Holds a linked list of itk::BloxCoreAtomItem&#39;s.">MedialNodeType</a>;
<a name="l00082"></a>00082
<a name="l00084"></a>00084 <span class="keyword">typedef</span> <a class="code" href="classitk_1_1UnaryMedialNodeMetric.html">UnaryMedialNodeMetric<itkGetStaticConstMacro(NDimensions)></a>
<a name="l00085"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#f5c1d75239811a93c76ae1b642de87d9">00085</a> <a class="code" href="classitk_1_1UnaryMedialNodeMetric.html">UnaryMetricType</a>;
<a name="l00086"></a>00086 <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1UnaryMedialNodeMetric.html" title="Compares the scale and dimensionality of two medial nodes.">UnaryMedialNodeMetric<itkGetStaticConstMacro(NDimensions)>::Pointer</a>
<a name="l00087"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#499e8be695ee9cba02a8faed7b3c075e">00087</a> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#499e8be695ee9cba02a8faed7b3c075e">UnaryMetricPointer</a>;
<a name="l00089"></a>00089
<a name="l00091"></a>00091 <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">CorrespondenceMatrixType</a> * <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#a120391a077625727c5df71c5f028fdd">GetOutput</a>(<span class="keywordtype">void</span>);
<a name="l00092"></a>00092 <a class="code" href="classitk_1_1MatrixResizeableDataObject.html" title="Allows for a vnl matrix to be a data object with the flexibility of being resizable...">CorrespondenceMatrixType</a> * <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#a120391a077625727c5df71c5f028fdd">GetOutput</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> idx);
<a name="l00094"></a>00094
<a name="l00096"></a>00096 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#179009485525c23733959eed21613b92">SetInput1</a>( <span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#4e7ec446ca77ef50dcea87ddb4c793b9">CoreAtomImageType</a> * CoreAtomImageA );
<a name="l00097"></a>00097
<a name="l00099"></a>00099 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#0ffac57a852778773c0ad02951c30daf">SetInput2</a>( <span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#4e7ec446ca77ef50dcea87ddb4c793b9">CoreAtomImageType</a> * CoreAtomImageB );
<a name="l00100"></a>00100
<a name="l00102"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#9ff8c42a182020123276176e6cbd3951">00102</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#9ff8c42a182020123276176e6cbd3951">Update</a>() {this-><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#60588804322a08d770ad98cee2714823">GenerateData</a>();}
<a name="l00103"></a>00103
<a name="l00104"></a>00104 <span class="keyword">virtual</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#260489ad2533518e312cb5210a1244d0">DataObjectPointer</a> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#c86eae6cc00856ab30eccf902f7966ee">MakeOutput</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> idx);
<a name="l00105"></a>00105
<a name="l00106"></a>00106 <span class="keyword">protected</span>:
<a name="l00107"></a>00107 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#c8b7ae32d734179f4f8e298799430933">CoreAtomImageToUnaryCorrespondenceMatrixProcess</a>();
<a name="l00108"></a><a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#3fd65eb86925a6d289113dc17a7a26cf">00108</a> <span class="keyword">virtual</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#3fd65eb86925a6d289113dc17a7a26cf">~CoreAtomImageToUnaryCorrespondenceMatrixProcess</a>(){}
<a name="l00109"></a>00109
<a name="l00110"></a>00110 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#bf0ec75b327ccd1b3ca6840eb2eed0f2">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00111"></a>00111
<a name="l00113"></a>00113 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#60588804322a08d770ad98cee2714823">GenerateData</a>();
<a name="l00114"></a>00114
<a name="l00116"></a>00116 TSourceImage * <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#3d54ea937c2ca5dc006a60105a4f4d5d">GetInput1</a>();
<a name="l00117"></a>00117 TSourceImage * <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#7eaf3b277a0cbc00918e27aab88d5a2f">GetInput2</a>();
<a name="l00119"></a>00119
<a name="l00120"></a>00120 <span class="keyword">private</span>:
<a name="l00121"></a>00121 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#c8b7ae32d734179f4f8e298799430933">CoreAtomImageToUnaryCorrespondenceMatrixProcess</a>(<span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#e4204aed042f7772e79c1eab96d3ce38">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00122"></a>00122 <span class="keywordtype">void</span> operator=(<span class="keyword">const</span> <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#e4204aed042f7772e79c1eab96d3ce38">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00123"></a>00123
<a name="l00124"></a>00124 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#377c30a0bd66795fbadcb1d9e1818d0a">CoreAtomImagePointer</a> m_CoreAtomImageA;
<a name="l00125"></a>00125 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#377c30a0bd66795fbadcb1d9e1818d0a">CoreAtomImagePointer</a> m_CoreAtomImageB;
<a name="l00126"></a>00126
<a name="l00127"></a>00127 <span class="keywordtype">int</span> m_Rows;
<a name="l00128"></a>00128 <span class="keywordtype">int</span> m_Columns;
<a name="l00129"></a>00129
<a name="l00130"></a>00130 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#13856729d69e48424a70d3b52f5a9e5a">CorrespondenceMatrixPointer</a> m_CorrespondenceMatrix;
<a name="l00131"></a>00131 <a class="code" href="classitk_1_1CoreAtomImageToUnaryCorrespondenceMatrixProcess.html#499e8be695ee9cba02a8faed7b3c075e">UnaryMetricPointer</a> m_Metric;
<a name="l00132"></a>00132
<a name="l00134"></a>00134 <span class="keywordtype">bool</span> m_OutputPNG;
<a name="l00135"></a>00135 };
<a name="l00136"></a>00136
<a name="l00137"></a>00137 } <span class="comment">// end namespace itk</span>
<a name="l00138"></a>00138
<a name="l00139"></a>00139 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00140"></a>00140 <span class="preprocessor"></span><span class="preprocessor">#include "itkCoreAtomImageToUnaryCorrespondenceMatrixProcess.txx"</span>
<a name="l00141"></a>00141 <span class="preprocessor">#endif</span>
<a name="l00142"></a>00142 <span class="preprocessor"></span>
<a name="l00143"></a>00143 <span class="preprocessor">#endif</span>
<a name="l00144"></a>00144 <span class="preprocessor"></span>
</pre></div></div>
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