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<h1>itkDeformableSimplexMesh3DFilter.h</h1><a href="itkDeformableSimplexMesh3DFilter_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkDeformableSimplexMesh3DFilter.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2008-12-08 16:00:52 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.15 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> Portions of this code are covered under the VTK copyright.</span>
<a name="l00013"></a>00013 <span class="comment"> See VTKCopyright.txt or http://www.kitware.com/VTKCopyright.htm for details.</span>
<a name="l00014"></a>00014 <span class="comment"></span>
<a name="l00015"></a>00015 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00016"></a>00016 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00017"></a>00017 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00018"></a>00018 <span class="comment"></span>
<a name="l00019"></a>00019 <span class="comment">=========================================================================*/</span>
<a name="l00020"></a>00020 <span class="preprocessor">#ifndef __itkDeformableSimplexMesh3DFilter_h</span>
<a name="l00021"></a>00021 <span class="preprocessor"></span><span class="preprocessor">#define __itkDeformableSimplexMesh3DFilter_h</span>
<a name="l00022"></a>00022 <span class="preprocessor"></span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkMeshToMeshFilter_8h.html">itkMeshToMeshFilter.h</a>"</span>
<a name="l00024"></a>00024 <span class="preprocessor">#include "<a class="code" href="itkSimplexMesh_8h.html">itkSimplexMesh.h</a>"</span>
<a name="l00025"></a>00025 <span class="preprocessor">#include "<a class="code" href="itkSimplexMeshGeometry_8h.html">itkSimplexMeshGeometry.h</a>"</span>
<a name="l00026"></a>00026 <span class="preprocessor">#include "<a class="code" href="itkImage_8h.html">itkImage.h</a>"</span>
<a name="l00027"></a>00027 <span class="preprocessor">#include "<a class="code" href="itkCovariantVector_8h.html">itkCovariantVector.h</a>"</span>
<a name="l00028"></a>00028 <span class="preprocessor">#include "<a class="code" href="itkVector_8h.html">itkVector.h</a>"</span>
<a name="l00029"></a>00029 <span class="preprocessor">#include "<a class="code" href="itkSphereSpatialFunction_8h.html">itkSphereSpatialFunction.h</a>"</span>
<a name="l00030"></a>00030 <span class="preprocessor">#include "<a class="code" href="itkFloodFilledSpatialFunctionConditionalIterator_8h.html">itkFloodFilledSpatialFunctionConditionalIterator.h</a>"</span>
<a name="l00031"></a>00031 <span class="preprocessor">#include "<a class="code" href="itkVectorGradientMagnitudeImageFilter_8h.html">itkVectorGradientMagnitudeImageFilter.h</a>"</span>
<a name="l00032"></a>00032 <span class="preprocessor">#include "<a class="code" href="itkBinaryThresholdImageFilter_8h.html">itkBinaryThresholdImageFilter.h</a>"</span>
<a name="l00033"></a>00033 <span class="preprocessor">#include "<a class="code" href="itkArray_8h.html">itkArray.h</a>"</span>
<a name="l00034"></a>00034
<a name="l00035"></a>00035 <span class="preprocessor">#include <set></span>
<a name="l00036"></a>00036
<a name="l00037"></a>00037 <span class="keyword">namespace </span>itk
<a name="l00038"></a>00038 {
<a name="l00039"></a>00039
<a name="l00071"></a>00071 <span class="keyword">template</span> <<span class="keyword">class</span> TInputMesh, <span class="keyword">class</span> TOutputMesh>
<a name="l00072"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html">00072</a> <span class="keyword">class </span><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html" title="Three-dimensional deformable model for image segmentation.">DeformableSimplexMesh3DFilter</a> : <span class="keyword">public</span> <a class="code" href="classitk_1_1MeshToMeshFilter.html" title="MeshToMeshFilter is the base class for all process objects that output mesh data...">MeshToMeshFilter</a><TInputMesh, TOutputMesh>
<a name="l00073"></a>00073 {
<a name="l00074"></a>00074 <span class="keyword">public</span>:
<a name="l00076"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#09246219fc28d58cc283bfa4cbe0656e">00076</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html" title="Three-dimensional deformable model for image segmentation.">DeformableSimplexMesh3DFilter</a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>;
<a name="l00077"></a>00077
<a name="l00079"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#3e2a3187564302848b573ee8b067b2a5">00079</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MeshToMeshFilter.html">MeshToMeshFilter<TInputMesh, TOutputMesh></a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Superclass</a>;
<a name="l00080"></a>00080
<a name="l00082"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#6461e08eb8473ca54fbd51e293cdc55f">00082</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<Self></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00083"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#391843f11fa3020d8ec249a0dea228aa">00083</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<const Self></a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00084"></a>00084
<a name="l00086"></a>00086 <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>);
<a name="l00087"></a>00087
<a name="l00089"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#4ca055c846bc7d681106963541d3c29c">00089</a> <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html" title="Three-dimensional deformable model for image segmentation.">DeformableSimplexMesh3DFilter</a>,<a class="code" href="classitk_1_1MeshToMeshFilter.html" title="MeshToMeshFilter is the base class for all process objects that output mesh data...">MeshToMeshFilter</a>);
<a name="l00090"></a>00090
<a name="l00092"></a>00092 <span class="keyword">typedef</span> TInputMesh <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#4ca055c846bc7d681106963541d3c29c">InputMeshType</a>;
<a name="l00093"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#a4fcf29a1ebb3f605457661ddcd1aa52">00093</a> <span class="keyword">typedef</span> TOutputMesh <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#a4fcf29a1ebb3f605457661ddcd1aa52">OutputMeshType</a>;
<a name="l00094"></a>00094
<a name="l00095"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f22ed08caa1f01f804447d483f17fce9">00095</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::PointsContainerPointer <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f22ed08caa1f01f804447d483f17fce9">InputPointsContainerPointer</a>;
<a name="l00096"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b7ce9eafcde677cf047f6e43279c7938">00096</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::PointsContainer <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b7ce9eafcde677cf047f6e43279c7938">InputPointsContainer</a>;
<a name="l00097"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#ff04336fd8d00eb84c50881357104884">00097</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::PointsContainer::Iterator <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#ff04336fd8d00eb84c50881357104884">InputPointsContainerIterator</a>;
<a name="l00098"></a>00098
<a name="l00100"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#677335bd841793991141ea6e868e18aa">00100</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Point.html">SimplexMeshGeometry::PointType</a> <a class="code" href="classitk_1_1Point.html">PointType</a>;
<a name="l00101"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b52c9cd975f4b53246bb98e76a7f2682">00101</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Vector.html" title="A templated class holding a n-Dimensional vector.">PointType::VectorType</a> <a class="code" href="classitk_1_1Vector.html" title="A templated class holding a n-Dimensional vector.">VectorType</a>;
<a name="l00102"></a>00102 <span class="keyword">typedef</span> <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">CovariantVector</a><
<a name="l00103"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#95980b48e6d6db70ea7f7f35d79bc6ed">00103</a> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Vector.html#1048e34a366d73fd16db005b8b25bf12">VectorType::ValueType</a>, 3 > <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">CovariantVectorType</a>;
<a name="l00104"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7d65ad0d971b7ca63fe3bf091a1a777f">00104</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::PixelType <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7d65ad0d971b7ca63fe3bf091a1a777f">PixelType</a>;
<a name="l00105"></a>00105
<a name="l00107"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#811fabd402c0e15bd086904d63daa57b">00107</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">CovariantVector<PixelType, 3></a> <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">GradientType</a>;
<a name="l00108"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b9805234e7a30c544bd6982cb4143a3e">00108</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">Image<GradientType, 3></a> <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">GradientImageType</a>;
<a name="l00109"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#1ff96f0b2caf9dd8254e7123cba15dc3">00109</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">Image<unsigned char, 3></a> <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">BinaryOutput</a>;
<a name="l00110"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#0f1c8191df162abef79e5214d4ae4273">00110</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">Image<float, 3></a> <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">MagnitudeOutput</a>;
<a name="l00111"></a>00111
<a name="l00112"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7b995854fab7a08cb103317855205ae0">00112</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">GradientImageType::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">GradientImagePointer</a>;
<a name="l00113"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#01c55315dc8ffda2bc604681999eac69">00113</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Image.html#42409699ba5aa72fcfdcdd05a910db6b">GradientImageType::IndexType</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#01c55315dc8ffda2bc604681999eac69">GradientIndexType</a>;
<a name="l00114"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#fa3807ec3440d60f18c616aadaf8562d">00114</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Image.html#d062e75a049f74b56dc498156c64c736">GradientImageType::PixelType</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#fa3807ec3440d60f18c616aadaf8562d">GradientPixelType</a>;
<a name="l00115"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#37a92474bd31a9676c522c9827c18c6c">00115</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> GradientIndexType::IndexValueType <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#37a92474bd31a9676c522c9827c18c6c">GradientIndexValueType</a>;
<a name="l00116"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#1978d4ae1590705bebc9e72c1baf7c46">00116</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Image.html#9c22529e667e574952547da68d0f0322">GradientImageType::SizeType</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#1978d4ae1590705bebc9e72c1baf7c46">GradientImageSizeType</a>;
<a name="l00117"></a>00117
<a name="l00118"></a>00118 <span class="comment">/* Mesh pointer definition. */</span>
<a name="l00119"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7d31624971e59b8f3f06e5139237ce03">00119</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">InputMeshType::Pointer</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7d31624971e59b8f3f06e5139237ce03">InputMeshPointer</a>;
<a name="l00120"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#39794c7544328e9848f85e89f05e192f">00120</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">OutputMeshType::Pointer</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#39794c7544328e9848f85e89f05e192f">OutputMeshPointer</a>;
<a name="l00121"></a>00121
<a name="l00122"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#e3618a36d3d3480a327320ac62bd2861">00122</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::PointType <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#e3618a36d3d3480a327320ac62bd2861">MeshPointType</a>;
<a name="l00123"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#49e051e0ea6ce996b24aca73ca503eed">00123</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::CellsContainerPointer <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#49e051e0ea6ce996b24aca73ca503eed">CellsContainerPointer</a>;
<a name="l00124"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#bef461e70249bffcd155498f5a47f6a5">00124</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::CellsContainer::Iterator <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#bef461e70249bffcd155498f5a47f6a5">CellsContainerIterator</a>;
<a name="l00125"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#6e2cd5dc65af92860238ff84623efd10">00125</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::NeighborListType <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#6e2cd5dc65af92860238ff84623efd10">InputNeighbors</a>;
<a name="l00126"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7a103ae3a46b017ac940a9c4dd589bc1">00126</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::NeighborListType::iterator <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#7a103ae3a46b017ac940a9c4dd589bc1">InputNeighborsIterator</a>;
<a name="l00127"></a>00127
<a name="l00128"></a>00128 <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MapContainer.html">itk::MapContainer<unsigned long, std::set<unsigned long></a> >
<a name="l00129"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#104c8c97ee23f78853a6c3be398486ac">00129</a> <a class="code" href="classitk_1_1MapContainer.html">VertexNeighborListType</a>;
<a name="l00130"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b6b2f713ed9cddfa4899a839b71acbe8">00130</a> <span class="keyword">typedef</span> std::set<unsigned long> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b6b2f713ed9cddfa4899a839b71acbe8">NeighborSetType</a>;
<a name="l00131"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8fff69dab8507b9670eef5dc04bdb4fc">00131</a> <span class="keyword">typedef</span> std::set<unsigned long> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8fff69dab8507b9670eef5dc04bdb4fc">IndexSetType</a>;
<a name="l00132"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f82089563da067aef0c40c09a49b6420">00132</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> NeighborSetType::iterator <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f82089563da067aef0c40c09a49b6420">NeighborSetIterator</a>;
<a name="l00133"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#af964ac02b9c633599b10d9bc0a66dae">00133</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> IndexSetType::iterator <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#af964ac02b9c633599b10d9bc0a66dae">IndexSetIterator</a>;
<a name="l00134"></a>00134
<a name="l00135"></a>00135
<a name="l00136"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8918df92c846a440921a91b22d2137fb">00136</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> InputMeshType::GeometryMapType <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8918df92c846a440921a91b22d2137fb">GeometryMapType</a>;
<a name="l00137"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#14df3bf9b43837cc1e33ac22b1493ee2">00137</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">GeometryMapType::Pointer</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#14df3bf9b43837cc1e33ac22b1493ee2">GeometryMapPointer</a>;
<a name="l00138"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f44640a25003ab96d4376368fb5e0c2b">00138</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> GeometryMapType::Iterator <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f44640a25003ab96d4376368fb5e0c2b">GeometryMapIterator</a>;
<a name="l00139"></a>00139
<a name="l00140"></a>00140
<a name="l00148"></a>00148 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Gradient, <a class="code" href="classitk_1_1SmartPointer.html">GradientImagePointer</a>);
<a name="l00149"></a>00149
<a name="l00153"></a>00153 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Gradient, <a class="code" href="classitk_1_1SmartPointer.html">GradientImagePointer</a>);
<a name="l00154"></a>00154
<a name="l00158"></a>00158 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Iterations, <span class="keywordtype">int</span>);
<a name="l00159"></a>00159 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Iterations, <span class="keywordtype">int</span>);
<a name="l00161"></a>00161
<a name="l00163"></a>00163 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Alpha, <span class="keywordtype">double</span>);
<a name="l00164"></a>00164
<a name="l00166"></a>00166 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Alpha, <span class="keywordtype">double</span>);
<a name="l00167"></a>00167
<a name="l00169"></a>00169 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Beta, <span class="keywordtype">double</span>);
<a name="l00170"></a>00170
<a name="l00172"></a>00172 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Beta, <span class="keywordtype">double</span>);
<a name="l00173"></a>00173
<a name="l00175"></a>00175 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Gamma, <span class="keywordtype">double</span>);
<a name="l00176"></a>00176
<a name="l00178"></a>00178 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Gamma, <span class="keywordtype">double</span>);
<a name="l00179"></a>00179
<a name="l00181"></a>00181 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Damping, <span class="keywordtype">double</span>);
<a name="l00182"></a>00182
<a name="l00184"></a>00184 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Damping, <span class="keywordtype">double</span>);
<a name="l00185"></a>00185
<a name="l00187"></a>00187 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Rigidity, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>);
<a name="l00188"></a>00188
<a name="l00190"></a>00190 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Rigidity, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>);
<a name="l00191"></a>00191
<a name="l00192"></a>00192 <a class="code" href="itkMacro_8h.html#b950b763422e5059348e6178e2a5f425">itkSetObjectMacro</a>(Data, <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8918df92c846a440921a91b22d2137fb">GeometryMapType</a> );
<a name="l00193"></a>00193 <a class="code" href="itkMacro_8h.html#f6bef9ee7e4c077b96a08848ed4e7660">itkGetObjectMacro</a>(Data, <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8918df92c846a440921a91b22d2137fb">GeometryMapType</a> );
<a name="l00194"></a>00194
<a name="l00196"></a>00196 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(ImageWidth,<span class="keywordtype">int</span>);
<a name="l00197"></a>00197 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(ImageHeight,<span class="keywordtype">int</span>);
<a name="l00198"></a>00198 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(ImageDepth,<span class="keywordtype">int</span>);
<a name="l00200"></a>00200
<a name="l00202"></a>00202 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(Step, <span class="keywordtype">int</span>);
<a name="l00203"></a>00203
<a name="l00204"></a>00204 <span class="keyword">protected</span>:
<a name="l00205"></a>00205 <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f258c9d1bc51348346b6e3d79adba386">DeformableSimplexMesh3DFilter</a>();
<a name="l00206"></a>00206 <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#cdb75bedb3e772957b9b29c1a2f7e110">~DeformableSimplexMesh3DFilter</a>();
<a name="l00207"></a>00207 <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f258c9d1bc51348346b6e3d79adba386">DeformableSimplexMesh3DFilter</a>(<span class="keyword">const</span> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00208"></a>00208 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#f18a81708c15f94964530e9fe007da47">operator=</a>(<span class="keyword">const</span> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00209"></a>00209
<a name="l00210"></a>00210 <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#8ab9d6610cd19c41139a575a886e4133">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00211"></a>00211
<a name="l00213"></a>00213 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#d9d772f203b3a97c50d7b02b5431fcf6">GenerateData</a>();
<a name="l00214"></a>00214
<a name="l00220"></a>00220 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b5a8e2637b8bf2d9134e7f0b492a7013">Initialize</a>();
<a name="l00221"></a>00221
<a name="l00227"></a>00227 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b1ce4eb47da4d605204993f38de1db8a">ComputeGeometry</a>();
<a name="l00228"></a>00228
<a name="l00234"></a>00234 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#59f14745111356e0722a271d2c6fdaa3">ComputeDisplacement</a>();
<a name="l00235"></a>00235
<a name="l00239"></a>00239 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#6d5125641023dcba6b577e47c74e7254">ComputeInternalForce</a>(<a class="code" href="classitk_1_1SimplexMeshGeometry.html" title="handle geometric properties for vertices of a simplx mesh">SimplexMeshGeometry</a>* data);
<a name="l00240"></a>00240
<a name="l00244"></a>00244 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#749786569914e05851897132f499dab5">ComputeExternalForce</a>(<a class="code" href="classitk_1_1SimplexMeshGeometry.html" title="handle geometric properties for vertices of a simplx mesh">SimplexMeshGeometry</a>* data);
<a name="l00245"></a>00245
<a name="l00250"></a>00250 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#ffbb765ada27a7c207f7171319c6d4b7">ComputeOutput</a>();
<a name="l00251"></a>00251
<a name="l00255"></a>00255 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#0c140e316ea7ab635145b86f9f7a46f5">UpdateReferenceMetrics</a>();
<a name="l00256"></a>00256
<a name="l00260"></a>00260 <span class="keywordtype">double</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#a3c386d83b106ed5c8fc6effdb3c4c3e">L_Func</a>(<span class="keywordtype">double</span> r,<span class="keywordtype">double</span> d, <span class="keywordtype">double</span> phi);
<a name="l00261"></a>00261
<a name="l00265"></a>00265 <a class="code" href="classitk_1_1Point.html">PointType</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#508411e67134815697774d37dfa09a53">ComputeBarycentricCoordinates</a>(<a class="code" href="classitk_1_1Point.html">PointType</a> p, <a class="code" href="classitk_1_1SimplexMeshGeometry.html" title="handle geometric properties for vertices of a simplx mesh">SimplexMeshGeometry</a>* data);
<a name="l00266"></a>00266
<a name="l00274"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#caa7a2ac897cf97c0394501da3a933a5">00274</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#caa7a2ac897cf97c0394501da3a933a5">m_Alpha</a>;
<a name="l00275"></a>00275
<a name="l00282"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#246911356f87250ef4841c5164e24bc5">00282</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#246911356f87250ef4841c5164e24bc5">m_Beta</a>;
<a name="l00283"></a>00283
<a name="l00290"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#300e10ed6455629185f401f2831da4b5">00290</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#300e10ed6455629185f401f2831da4b5">m_Gamma</a>;
<a name="l00291"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#bcfc4190ab816b51cbd1edd965de5da4">00291</a> <span class="keywordtype">double</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#bcfc4190ab816b51cbd1edd965de5da4">m_Damping</a>;
<a name="l00292"></a>00292
<a name="l00299"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#bdc38f95f06e9939707dfeaa5e929751">00299</a> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#bdc38f95f06e9939707dfeaa5e929751">m_Rigidity</a>;
<a name="l00300"></a>00300
<a name="l00301"></a>00301 <span class="comment">// definition of internal parameters</span>
<a name="l00303"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#9e824dadd122adf38127f849d8467b33">00303</a> <span class="comment"></span> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#9e824dadd122adf38127f849d8467b33">m_Step</a>;
<a name="l00304"></a>00304
<a name="l00306"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#ed7e25950cd3423985a20f0ffb857a59">00306</a> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#ed7e25950cd3423985a20f0ffb857a59">m_ImageWidth</a>;
<a name="l00307"></a>00307
<a name="l00309"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#0268ff7261c5d99c75a08cdec27faf1f">00309</a> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#0268ff7261c5d99c75a08cdec27faf1f">m_ImageHeight</a>;
<a name="l00310"></a>00310
<a name="l00312"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b87fa8456ff0bf92ed5fa21ef9e7429f">00312</a> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b87fa8456ff0bf92ed5fa21ef9e7429f">m_ImageDepth</a>;
<a name="l00313"></a>00313
<a name="l00315"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#29468b92806db3eeed8d3dd5a27ef242">00315</a> <span class="keywordtype">int</span> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#29468b92806db3eeed8d3dd5a27ef242">m_Iterations</a>;
<a name="l00316"></a>00316
<a name="l00320"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#9e5113d8399d90533bdeec6eb07f66fc">00320</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#14df3bf9b43837cc1e33ac22b1493ee2">GeometryMapPointer</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#9e5113d8399d90533bdeec6eb07f66fc">m_Data</a>;
<a name="l00321"></a>00321
<a name="l00322"></a>00322 <span class="comment">/* gradient image pointer */</span>
<a name="l00323"></a><a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b1e45e65c748fcf5353ac8b0ef4af9a8">00323</a> <a class="code" href="classitk_1_1SmartPointer.html">GradientImagePointer</a> <a class="code" href="classitk_1_1DeformableSimplexMesh3DFilter.html#b1e45e65c748fcf5353ac8b0ef4af9a8">m_Gradient</a>;
<a name="l00324"></a>00324
<a name="l00325"></a>00325
<a name="l00326"></a>00326 }; <span class="comment">// end of class</span>
<a name="l00327"></a>00327
<a name="l00328"></a>00328
<a name="l00329"></a>00329 } <span class="comment">// end namespace itk</span>
<a name="l00330"></a>00330
<a name="l00331"></a>00331 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00332"></a>00332 <span class="preprocessor"></span><span class="preprocessor">#include "itkDeformableSimplexMesh3DFilter.txx"</span>
<a name="l00333"></a>00333 <span class="preprocessor">#endif</span>
<a name="l00334"></a>00334 <span class="preprocessor"></span>
<a name="l00335"></a>00335 <span class="preprocessor">#endif //__itkDeformableSimplexMesh3DFilter_h</span>
<a name="l00336"></a>00336 <span class="preprocessor"></span>
</pre></div></div>
<hr><address><small>
Generated at Thu May 7 22:33:08 2009 for ITK by <a href="http://www.stack.nl/~dimitri/doxygen/index.html"> <img
src="http://www.stack.nl/~dimitri/doxygen/doxygen.png" alt="doxygen"
align="middle" border=0 width=110 height=53>
</a> 1.5.9 written by <a href="mailto:dimitri@stack.nl">Dimitri van Heesch</a>,
© 1997-2000</small></address>
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