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<h1>itkImageSeriesReader.h</h1><a href="itkImageSeriesReader_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkImageSeriesReader.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2009-02-20 23:32:06 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.15 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkImageSeriesReader_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkImageSeriesReader_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkImageSource_8h.html">itkImageSource.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkImageIOBase_8h.html">itkImageIOBase.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkExceptionObject_8h.html">itkExceptionObject.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkSize_8h.html">itkSize.h</a>"</span>
<a name="l00024"></a>00024 <span class="preprocessor">#include "<a class="code" href="itkImageRegion_8h.html">itkImageRegion.h</a>"</span>
<a name="l00025"></a>00025 <span class="preprocessor">#include <vector></span>
<a name="l00026"></a>00026 <span class="preprocessor">#include <string></span>
<a name="l00027"></a>00027 <span class="preprocessor">#include "<a class="code" href="itkMetaDataDictionary_8h.html">itkMetaDataDictionary.h</a>"</span>
<a name="l00028"></a>00028
<a name="l00029"></a>00029 <span class="keyword">namespace </span>itk
<a name="l00030"></a>00030 {
<a name="l00031"></a>00031
<a name="l00046"></a>00046 <span class="keyword">template</span> <<span class="keyword">class</span> TOutputImage>
<a name="l00047"></a><a class="code" href="classitk_1_1ImageSeriesReader.html">00047</a> <span class="keyword">class </span><a class="code" href="itkWin32Header_8h.html#7d4384322557205d75f0719c012dded6">ITK_EXPORT</a> <a class="code" href="classitk_1_1ImageSeriesReader.html" title="Data source that reads image data from a series of disk files.">ImageSeriesReader</a> : <span class="keyword">public</span> <a class="code" href="classitk_1_1ImageSource.html" title="Base class for all process objects that output image data.">ImageSource</a><TOutputImage>
<a name="l00048"></a>00048 {
<a name="l00049"></a>00049 <span class="keyword">public</span>:
<a name="l00051"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#b7077da6db88a012febe4cab1abcb8ca">00051</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ImageSeriesReader.html" title="Data source that reads image data from a series of disk files.">ImageSeriesReader</a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>;
<a name="l00052"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#11a6f5d17b36147bbbfa5697791288a0">00052</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ImageSource.html">ImageSource<TOutputImage></a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Superclass</a>;
<a name="l00053"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#4bb45d76847574e51a8e665cf019bc48">00053</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<Self></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00054"></a>00054
<a name="l00056"></a>00056 <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>);
<a name="l00057"></a>00057
<a name="l00059"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#47963d446aa638bd9b21f97a9d511f62">00059</a> <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1ImageSeriesReader.html" title="Data source that reads image data from a series of disk files.">ImageSeriesReader</a>, <a class="code" href="classitk_1_1ImageSource.html" title="Base class for all process objects that output image data.">ImageSource</a>);
<a name="l00060"></a>00060
<a name="l00062"></a>00062 <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#5bf82236e1e50e653de84c8ead448599">TOutputImage::SizeType</a> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#5bf82236e1e50e653de84c8ead448599">SizeType</a>;
<a name="l00063"></a>00063
<a name="l00065"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#bf638afb9e90c23c5d27d26f8ff458af">00065</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#be32dc19e71d40322ad9828b9ab40853">TOutputImage::IndexType</a> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#be32dc19e71d40322ad9828b9ab40853">IndexType</a>;
<a name="l00066"></a>00066
<a name="l00068"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#3e3fdd827c5be1151936b65d36c5e8a2">00068</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ed8c4a40607d317c666eb96ea265e126">TOutputImage::RegionType</a> ImageRegionType;
<a name="l00069"></a>00069
<a name="l00071"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#e3f3e0305eb87a83a816fb7fbc6d7960">00071</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> TOutputImage::PixelType OutputImagePixelType;
<a name="l00072"></a>00072
<a name="l00074"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#ea385787b328cfb12ad5a4a53fc0f61b">00074</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MetaDataDictionary.html">MetaDataDictionary</a> <a class="code" href="classitk_1_1MetaDataDictionary.html">DictionaryType</a>;
<a name="l00075"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#c49b545f2a2270dd14f94a462d96872e">00075</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MetaDataDictionary.html">MetaDataDictionary</a> * <a class="code" href="classitk_1_1MetaDataDictionary.html">DictionaryRawPointer</a>;
<a name="l00076"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#49cad6079071bdf34ae6fa31bfd585e2">00076</a> <span class="keyword">typedef</span> std::vector< DictionaryRawPointer > DictionaryArrayType;
<a name="l00077"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#293642dc820908c1bd4a94fc80da7066">00077</a> <span class="keyword">typedef</span> <span class="keyword">const</span> DictionaryArrayType * DictionaryArrayRawPointer;
<a name="l00078"></a>00078
<a name="l00079"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#7415bb66515f8505db1a2401afb3e4b8">00079</a> <span class="keyword">typedef</span> std::vector<std::string> FileNamesContainer;
<a name="l00080"></a>00080
<a name="l00083"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#edb3ea58c4bb4975f46ef9c85a855aa6">00083</a> <span class="keywordtype">void</span> SetFileNames (<span class="keyword">const</span> FileNamesContainer &name)
<a name="l00084"></a>00084 {
<a name="l00085"></a>00085 <span class="keywordflow">if</span> ( m_FileNames != name)
<a name="l00086"></a>00086 {
<a name="l00087"></a>00087 m_FileNames = name;
<a name="l00088"></a>00088 this->Modified();
<a name="l00089"></a>00089 }
<a name="l00090"></a>00090 }
<a name="l00091"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#f5cb3ed304dbbcb3d6eb3840e1f37a72">00091</a> <span class="keyword">const</span> FileNamesContainer & GetFileNames()<span class="keyword"> const</span>
<a name="l00092"></a>00092 <span class="keyword"> </span>{
<a name="l00093"></a>00093 <span class="keywordflow">return</span> m_FileNames;
<a name="l00094"></a>00094 }
<a name="l00096"></a>00096
<a name="l00099"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#8383ccb92778ece9d091e64003eeded6">00099</a> <span class="keywordtype">void</span> SetFileName (std::string <span class="keyword">const</span> &name)
<a name="l00100"></a>00100 {
<a name="l00101"></a>00101 m_FileNames.clear();
<a name="l00102"></a>00102 m_FileNames.push_back(name);
<a name="l00103"></a>00103 this->Modified();
<a name="l00104"></a>00104 }
<a name="l00106"></a>00106
<a name="l00109"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#0f5a3c819917693f2d810a3cabdf6a4e">00109</a> <span class="keywordtype">void</span> AddFileName (std::string <span class="keyword">const</span> &name)
<a name="l00110"></a>00110 {
<a name="l00111"></a>00111 m_FileNames.push_back(name);
<a name="l00112"></a>00112 this->Modified();
<a name="l00113"></a>00113 }
<a name="l00115"></a>00115
<a name="l00118"></a>00118 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(ReverseOrder,<span class="keywordtype">bool</span>);
<a name="l00119"></a>00119 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(ReverseOrder,<span class="keywordtype">bool</span>);
<a name="l00120"></a>00120 <a class="code" href="itkMacro_8h.html#9e7d129ffebb09fd28bc213e02d87248">itkBooleanMacro</a>(ReverseOrder);
<a name="l00122"></a>00122
<a name="l00127"></a>00127 <a class="code" href="itkMacro_8h.html#b950b763422e5059348e6178e2a5f425">itkSetObjectMacro</a>(ImageIO,<a class="code" href="classitk_1_1ImageIOBase.html" title="Abstract superclass defines image IO interface.">ImageIOBase</a>);
<a name="l00128"></a>00128 <a class="code" href="itkMacro_8h.html#f6bef9ee7e4c077b96a08848ed4e7660">itkGetObjectMacro</a>(ImageIO,<a class="code" href="classitk_1_1ImageIOBase.html" title="Abstract superclass defines image IO interface.">ImageIOBase</a>);
<a name="l00130"></a>00130
<a name="l00133"></a>00133 <span class="keyword">virtual</span> <span class="keywordtype">void</span> GenerateOutputInformation(<span class="keywordtype">void</span>);
<a name="l00134"></a>00134
<a name="l00140"></a>00140 <span class="keyword">virtual</span> <span class="keywordtype">void</span> EnlargeOutputRequestedRegion(<a class="code" href="classitk_1_1DataObject.html" title="Base class for all data objects in ITK.">DataObject</a> *output);
<a name="l00141"></a>00141
<a name="l00143"></a>00143 DictionaryArrayRawPointer GetMetaDataDictionaryArray() <span class="keyword">const</span>;
<a name="l00144"></a>00144
<a name="l00146"></a>00146 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(UseStreaming,<span class="keywordtype">bool</span>);
<a name="l00147"></a>00147 <a class="code" href="itkMacro_8h.html#7d989c13a1a213168db99ae0f84185d4">itkGetConstReferenceMacro</a>(UseStreaming,<span class="keywordtype">bool</span>);
<a name="l00148"></a>00148 <a class="code" href="itkMacro_8h.html#9e7d129ffebb09fd28bc213e02d87248">itkBooleanMacro</a>(UseStreaming);
<a name="l00150"></a>00150
<a name="l00151"></a>00151 <span class="keyword">protected</span>:
<a name="l00152"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#e19220c9f74c654adbb51eedaedadf4d">00152</a> <a class="code" href="classitk_1_1ImageSeriesReader.html#e19220c9f74c654adbb51eedaedadf4d">ImageSeriesReader</a>() : m_ImageIO(0), m_ReverseOrder(false), m_UseStreaming(true) {};
<a name="l00153"></a>00153 ~<a class="code" href="classitk_1_1ImageSeriesReader.html" title="Data source that reads image data from a series of disk files.">ImageSeriesReader</a>();
<a name="l00154"></a>00154 <span class="keywordtype">void</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#920ae03048a5ad715d803ca2e92b52de">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00155"></a>00155
<a name="l00157"></a>00157 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#f75a5945cdd8315676941024a0b8c1e9">GenerateData</a>();
<a name="l00158"></a>00158
<a name="l00160"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#ef3538040bc8fad07c8dc09308f13533">00160</a> <a class="code" href="classitk_1_1SmartPointer.html">ImageIOBase::Pointer</a> m_ImageIO;
<a name="l00161"></a>00161
<a name="l00163"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#98fdd4fd3e44617df4dfcc9f1a7d1320">00163</a> <span class="keywordtype">bool</span> m_ReverseOrder;
<a name="l00164"></a>00164
<a name="l00166"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#57914512f751d5113d4806023dff4b5f">00166</a> FileNamesContainer m_FileNames;
<a name="l00167"></a>00167
<a name="l00170"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#d1e06ae88a256fc5344ebf15b8a23639">00170</a> <span class="keywordtype">int</span> m_NumberOfDimensionsInImage;
<a name="l00171"></a>00171
<a name="l00174"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#ad437cb6b2536721e088653e06b8aca8">00174</a> DictionaryArrayType m_MetaDataDictionaryArray;
<a name="l00175"></a>00175
<a name="l00176"></a><a class="code" href="classitk_1_1ImageSeriesReader.html#510e4dcfc70447eb2fbdbd195a195eac">00176</a> <span class="keywordtype">bool</span> m_UseStreaming;
<a name="l00177"></a>00177
<a name="l00178"></a>00178 <span class="keyword">private</span>:
<a name="l00179"></a>00179 <a class="code" href="classitk_1_1ImageSeriesReader.html" title="Data source that reads image data from a series of disk files.">ImageSeriesReader</a>(<span class="keyword">const</span> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00180"></a>00180 <span class="keywordtype">void</span> operator=(<span class="keyword">const</span> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00181"></a>00181 };
<a name="l00182"></a>00182
<a name="l00183"></a>00183 } <span class="comment">//namespace ITK</span>
<a name="l00184"></a>00184
<a name="l00185"></a>00185 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00186"></a>00186 <span class="preprocessor"></span><span class="preprocessor">#include "itkImageSeriesReader.txx"</span>
<a name="l00187"></a>00187 <span class="preprocessor">#endif</span>
<a name="l00188"></a>00188 <span class="preprocessor"></span>
<a name="l00189"></a>00189 <span class="preprocessor">#endif // __itkImageSeriesReader_h</span>
<a name="l00190"></a>00190 <span class="preprocessor"></span>
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