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<h1>itkImageToCooccurrenceListAdaptor.h</h1><a href="itkImageToCooccurrenceListAdaptor_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkImageToCooccurrenceListAdaptor.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2008-01-16 19:08:02 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.6 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017
<a name="l00018"></a>00018 <span class="preprocessor">#ifndef __itkImageToCooccurrenceListAdaptor_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span><span class="preprocessor">#define __itkImageToCooccurrenceListAdaptor_h</span>
<a name="l00020"></a>00020 <span class="preprocessor"></span>
<a name="l00021"></a>00021 <span class="preprocessor">#include <typeinfo></span>
<a name="l00022"></a>00022
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkImage_8h.html">itkImage.h</a>"</span>
<a name="l00024"></a>00024 <span class="preprocessor">#include "itkPixelTraits.h"</span>
<a name="l00025"></a>00025 <span class="preprocessor">#include "<a class="code" href="itkImageToListAdaptor_8h.html">itkImageToListAdaptor.h</a>"</span>
<a name="l00026"></a>00026 <span class="preprocessor">#include "<a class="code" href="itkSmartPointer_8h.html">itkSmartPointer.h</a>"</span>
<a name="l00027"></a>00027 <span class="preprocessor">#include "<a class="code" href="itkImageRegionIterator_8h.html">itkImageRegionIterator.h</a>"</span>
<a name="l00028"></a>00028 <span class="preprocessor">#include "<a class="code" href="itkShapedNeighborhoodIterator_8h.html">itkShapedNeighborhoodIterator.h</a>"</span>
<a name="l00029"></a>00029 <span class="preprocessor">#include "<a class="code" href="itkNeighborhoodIterator_8h.html">itkNeighborhoodIterator.h</a>"</span>
<a name="l00030"></a>00030 <span class="preprocessor">#include "<a class="code" href="itkNeighborhoodAlgorithm_8h.html">itkNeighborhoodAlgorithm.h</a>"</span>
<a name="l00031"></a>00031 <span class="preprocessor">#include "<a class="code" href="itkConstantBoundaryCondition_8h.html">itkConstantBoundaryCondition.h</a>"</span>
<a name="l00032"></a>00032 <span class="preprocessor">#include "<a class="code" href="itkListSample_8h.html">itkListSample.h</a>"</span>
<a name="l00033"></a>00033 <span class="preprocessor">#include "<a class="code" href="itkFixedArray_8h.html">itkFixedArray.h</a>"</span>
<a name="l00034"></a>00034 <span class="preprocessor">#include "<a class="code" href="itkMacro_8h.html">itkMacro.h</a>"</span>
<a name="l00035"></a>00035
<a name="l00036"></a>00036 <span class="preprocessor">#include <vector></span>
<a name="l00037"></a>00037 <span class="preprocessor">#include <algorithm></span>
<a name="l00038"></a>00038 <span class="preprocessor">#include <iostream></span>
<a name="l00039"></a>00039
<a name="l00040"></a>00040 <span class="keyword">namespace </span>itk{
<a name="l00041"></a>00041 <span class="keyword">namespace </span>Statistics{
<a name="l00042"></a>00042
<a name="l00053"></a>00053 <span class="keyword">template</span> < <span class="keyword">class</span> TImage >
<a name="l00054"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html">00054</a> <span class="keyword">class </span><a class="code" href="itkWin32Header_8h.html#7d4384322557205d75f0719c012dded6">ITK_EXPORT</a> <a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html" title="Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram...">ImageToCooccurrenceListAdaptor</a>
<a name="l00055"></a>00055 : <span class="keyword">public</span> <a class="code" href="classitk_1_1Statistics_1_1ImageToListAdaptor.html" title="This class provides ListSampleBase interfaces to ITK Image.">ImageToListAdaptor</a><
<a name="l00056"></a>00056 TImage,
<a name="l00057"></a>00057 FixedArray< typename TImage::PixelType, 2 > >
<a name="l00058"></a>00058 {
<a name="l00059"></a>00059 <span class="keyword">public</span>:
<a name="l00060"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#6a0289e0da73726ceb494e4c4f7a0443">00060</a> <span class="keyword">typedef</span> TImage ImageType;
<a name="l00061"></a>00061
<a name="l00062"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#815771bd5d06ba5cf45f530592dfe172">00062</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1FixedArray.html" title="Simulate a standard C array with copy semnatics.">FixedArray< typename TImage::PixelType, 2 ></a> <a class="code" href="classitk_1_1FixedArray.html" title="Simulate a standard C array with copy semnatics.">MeasurementVectorType</a> ;
<a name="l00063"></a>00063
<a name="l00064"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#8e6997b6e4efe97805ad4a4b2ef97e7f">00064</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Statistics_1_1ListSample.html" title="This class is the native implementation of the ListSampleBase.">itk::Statistics::ListSample< MeasurementVectorType ></a> <a class="code" href="classitk_1_1Statistics_1_1ListSample.html" title="This class is the native implementation of the ListSampleBase.">SampleType</a> ;
<a name="l00065"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#efa7a7646b539e509283c74a21f5c34d">00065</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> SampleType::MeasurementVectorSizeType MeasurementVectorSizeType;
<a name="l00066"></a>00066
<a name="l00068"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#9fd0833727de5413435a28baad271ab2">00068</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html" title="Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram...">ImageToCooccurrenceListAdaptor</a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>;
<a name="l00069"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#596d2602c9493eb7239d87c93c7d2346">00069</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Statistics_1_1ImageToListAdaptor.html" title="This class provides ListSampleBase interfaces to ITK Image.">ImageToListAdaptor< TImage, MeasurementVectorType ></a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Superclass</a>;
<a name="l00070"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#41cbce100b42934d0346255d06f0f3f5">00070</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer< Self ></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00071"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#55152e0b3b100a30d7179dcd9271eb7e">00071</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<const Self></a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00072"></a>00072
<a name="l00074"></a>00074 <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ShapedNeighborhoodIterator.html" title="A neighborhood iterator which can take on an arbitrary shape.">itk::ShapedNeighborhoodIterator</a><
<a name="l00075"></a>00075 TImage ,
<a name="l00076"></a>00076 <a class="code" href="classitk_1_1ConstantBoundaryCondition.html" title="This boundary condition returns a constant value for out-of-bounds image pixels.">ConstantBoundaryCondition<TImage></a>
<a name="l00077"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#d1f94ee56a440f298dff6fd061fd2e9b">00077</a> > <a class="code" href="classitk_1_1ShapedNeighborhoodIterator.html" title="A neighborhood iterator which can take on an arbitrary shape.">ShapedNeighborhoodIteratorType</a>;
<a name="l00078"></a>00078
<a name="l00080"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#28cd49eca1f02757405a547321f9d550">00080</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Offset.html">ShapedNeighborhoodIteratorType::OffsetType</a> <a class="code" href="classitk_1_1Offset.html">OffsetType</a>;
<a name="l00081"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#ebe720c0365bbcd0911b73ca465df3cb">00081</a> <span class="keyword">typedef</span> std::vector<OffsetType> OffsetTable;
<a name="l00082"></a>00082
<a name="l00083"></a>00083 <span class="keywordtype">void</span> UseNeighbor(<span class="keyword">const</span> <a class="code" href="classitk_1_1Offset.html">OffsetType</a> & offset);
<a name="l00084"></a>00084
<a name="l00086"></a>00086 <span class="keywordtype">void</span> Compute();
<a name="l00087"></a>00087
<a name="l00089"></a>00089 <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html" title="Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram...">ImageToCooccurrenceListAdaptor</a>, <a class="code" href="classitk_1_1Statistics_1_1ListSampleBase.html" title="This class is the base class for Samples that store measurements in a list.">ListSampleBase</a>);
<a name="l00090"></a>00090
<a name="l00092"></a>00092 <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>);
<a name="l00093"></a>00093
<a name="l00095"></a>00095 <a class="code" href="itkMacro_8h.html#1905cf6b2e88235996fa7ff73b2fb0eb">itkStaticConstMacro</a>(MeasurementVectorSize, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>, 2);
<a name="l00096"></a>00096
<a name="l00097"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#5fc0296c406bbb68c4afdf23b6fe7c3c">00097</a> <span class="keyword">virtual</span> <span class="keywordtype">void</span> SetMeasurementVectorSize( <span class="keyword">const</span> MeasurementVectorSizeType )
<a name="l00098"></a>00098 {
<a name="l00099"></a>00099 <span class="comment">// Measurement vector size for this class is fixed as the pixel's </span>
<a name="l00100"></a>00100 <span class="comment">// dimension. This method should have no effect</span>
<a name="l00101"></a>00101 <a class="code" href="itkMacro_8h.html#0c47033c6ca9aae1319b1793f4419ada">itkWarningMacro</a>( << <span class="stringliteral">"This method does nothing! The MeasurementVectorSize is "</span>
<a name="l00102"></a>00102 << MeasurementVectorSize );
<a name="l00103"></a>00103 }
<a name="l00104"></a>00104
<a name="l00105"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#7802585ec0bf5bb5857066fea91c35d2">00105</a> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> GetMeasurementVectorSize()<span class="keyword"> const</span>
<a name="l00106"></a>00106 <span class="keyword"> </span>{
<a name="l00107"></a>00107 <span class="keywordflow">return</span> Superclass::MeasurementVectorSize;
<a name="l00108"></a>00108 }
<a name="l00109"></a>00109
<a name="l00110"></a>00110
<a name="l00113"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#5f462164cb32b4104f2a8bd1f4620f3e">00113</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::PixelType PixelType ;
<a name="l00114"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#23b40a325c485ba09e25d09ee77b5551">00114</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::FrequencyType FrequencyType ;
<a name="l00115"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#b3ce8b92676feec744396a34c4828ef0">00115</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::MeasurementType MeasurementType ;
<a name="l00116"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#df778ceb2e345f9ff3da91ae5d1f2c97">00116</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::InstanceIdentifier InstanceIdentifier ;
<a name="l00117"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#d0f18f6b835a4eac2f93eaa5a0039b2f">00117</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1FixedArray.html" title="Simulate a standard C array with copy semnatics.">MeasurementVectorType</a> <a class="code" href="classitk_1_1FixedArray.html" title="Simulate a standard C array with copy semnatics.">ValueType</a> ;
<a name="l00118"></a>00118
<a name="l00120"></a>00120 <a class="code" href="itkMacro_8h.html#1905cf6b2e88235996fa7ff73b2fb0eb">itkStaticConstMacro</a>(ImageDimension, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>,
<a name="l00121"></a>00121 TImage::ImageDimension);
<a name="l00122"></a>00122
<a name="l00123"></a>00123
<a name="l00124"></a>00124 <span class="keyword">protected</span>:
<a name="l00125"></a>00125 <a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html" title="Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram...">ImageToCooccurrenceListAdaptor</a>();
<a name="l00126"></a><a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#8fc928831fc15bf6681ce32d3a36ad10">00126</a> <span class="keyword">virtual</span> <a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html#8fc928831fc15bf6681ce32d3a36ad10">~ImageToCooccurrenceListAdaptor</a>() {}
<a name="l00127"></a>00127 <span class="keywordtype">void</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#920ae03048a5ad715d803ca2e92b52de">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00128"></a>00128
<a name="l00129"></a>00129 <span class="keyword">private</span>:
<a name="l00130"></a>00130 <a class="code" href="classitk_1_1Statistics_1_1ImageToCooccurrenceListAdaptor.html" title="Converts pixel data into a list of pairs in order to compute a cooccurrence Histogram...">ImageToCooccurrenceListAdaptor</a>(<span class="keyword">const</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ac7d0120fe5292cdcdddb6163b8cb150">Self</a>&) ; <span class="comment">//purposely not implemented</span>
<a name="l00131"></a>00131 <span class="keywordtype">void</span> operator=(<span class="keyword">const</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ac7d0120fe5292cdcdddb6163b8cb150">Self</a>&) ; <span class="comment">//purposely not implemented</span>
<a name="l00132"></a>00132 OffsetTable m_OffsetTable;
<a name="l00133"></a>00133 <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">SampleType::Pointer</a> sample;
<a name="l00134"></a>00134 } ; <span class="comment">// end of class ScalarImageToListAdaptor</span>
<a name="l00135"></a>00135
<a name="l00136"></a>00136 } <span class="comment">// end of namespace Statistics</span>
<a name="l00137"></a>00137 } <span class="comment">// end of namespace itk</span>
<a name="l00138"></a>00138
<a name="l00139"></a>00139 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00140"></a>00140 <span class="preprocessor"></span><span class="preprocessor">#include "itkImageToCooccurrenceListAdaptor.txx"</span>
<a name="l00141"></a>00141 <span class="preprocessor">#endif</span>
<a name="l00142"></a>00142 <span class="preprocessor"></span>
<a name="l00143"></a>00143 <span class="preprocessor">#endif</span>
<a name="l00144"></a>00144 <span class="preprocessor"></span>
</pre></div></div>
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