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<h1>itkMRASlabIdentifier.h</h1><a href="itkMRASlabIdentifier_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkMRASlabIdentifier.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2009-01-26 21:45:50 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.16 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkMRASlabIdentifier_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkMRASlabIdentifier_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkObject_8h.html">itkObject.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkImage_8h.html">itkImage.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include <vector></span>
<a name="l00023"></a>00023
<a name="l00024"></a>00024
<a name="l00025"></a>00025 <span class="keyword">namespace </span>itk
<a name="l00026"></a>00026 {
<a name="l00027"></a>00027
<a name="l00064"></a>00064 <span class="keyword">template</span> <<span class="keyword">class</span> TInputImage>
<a name="l00065"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html">00065</a> <span class="keyword">class </span><a class="code" href="itkWin32Header_8h.html#7d4384322557205d75f0719c012dded6">ITK_EXPORT</a> <a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">MRASlabIdentifier</a> : <span class="keyword">public</span> <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Object</a>
<a name="l00066"></a>00066 {
<a name="l00067"></a>00067 <span class="keyword">public</span>:
<a name="l00069"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#64d44a6693473c99a73fe0c33b333e07">00069</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">MRASlabIdentifier</a> <a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">Self</a>;
<a name="l00070"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#c5a7f07c54eebb79d25ec9bfc3a2f208">00070</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Object</a> <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Superclass</a>;
<a name="l00071"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#a7be6be7db8ec29b57a1e86a5fae6ecd">00071</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<Self></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00072"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#e5a4ceef80ba82c0e3c09694c36b6dbc">00072</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<const Self></a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00073"></a>00073
<a name="l00075"></a>00075 <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">MRASlabIdentifier</a>, <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Object</a>);
<a name="l00076"></a>00076
<a name="l00078"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#daed4aefacf4616c2b1fde8b088848ed">00078</a> <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">Self</a>);
<a name="l00079"></a>00079
<a name="l00081"></a>00081 <span class="keyword">typedef</span> TInputImage ImageType;
<a name="l00082"></a>00082
<a name="l00084"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#22cb4350881b4e6aa4cbaf81f8c7a225">00084</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">TInputImage::Pointer</a> ImagePointer;
<a name="l00085"></a>00085
<a name="l00087"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#1125b3edd1eab8337b14277971af0c12">00087</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#68fafcc6909430ccd70cbc4aeee0107c">TInputImage::ConstPointer</a> ImageConstPointer;
<a name="l00088"></a>00088
<a name="l00090"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#acfc68dbfabbf44e24fcd7b990754ed9">00090</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> TInputImage::PixelType ImagePixelType;
<a name="l00091"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#86f873dd090dab6b7c35491aebc91ec0">00091</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#be32dc19e71d40322ad9828b9ab40853">TInputImage::IndexType</a> ImageIndexType;
<a name="l00092"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#bbb15ca4a6841d7772f0f4dfb7a3fc79">00092</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#5bf82236e1e50e653de84c8ead448599">TInputImage::SizeType</a> ImageSizeType;
<a name="l00093"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#76793af8a6caea237371ce258affbd21">00093</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ed8c4a40607d317c666eb96ea265e126">TInputImage::RegionType</a> ImageRegionType;
<a name="l00094"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#3258d15a88d2d8d6c198e014c02f29dc">00094</a> <span class="keyword">typedef</span> std::vector<ImageRegionType> SlabRegionVectorType;
<a name="l00095"></a>00095
<a name="l00097"></a>00097 <a class="code" href="itkMacro_8h.html#1e680e0abf41fd9bbefa2829ea3d1e6a">itkSetConstObjectMacro</a>( <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">Image</a>, ImageType );
<a name="l00098"></a>00098 <a class="code" href="itkMacro_8h.html#d11f8adb47609be2b4b58948904f8a7c">itkGetConstObjectMacro</a>( <a class="code" href="classitk_1_1Image.html" title="Templated n-dimensional image class.">Image</a>, ImageType );
<a name="l00100"></a>00100
<a name="l00102"></a>00102 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(NumberOfSamples, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>);
<a name="l00103"></a>00103 <a class="code" href="itkMacro_8h.html#7d989c13a1a213168db99ae0f84185d4">itkGetConstReferenceMacro</a>(NumberOfSamples, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>);
<a name="l00105"></a>00105
<a name="l00107"></a>00107 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(BackgroundMinimumThreshold, ImagePixelType);
<a name="l00108"></a>00108 <a class="code" href="itkMacro_8h.html#7d989c13a1a213168db99ae0f84185d4">itkGetConstReferenceMacro</a>(BackgroundMinimumThreshold, ImagePixelType);
<a name="l00110"></a>00110
<a name="l00112"></a>00112 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(Tolerance, <span class="keywordtype">double</span>);
<a name="l00113"></a>00113 <a class="code" href="itkMacro_8h.html#7d989c13a1a213168db99ae0f84185d4">itkGetConstReferenceMacro</a>(Tolerance, <span class="keywordtype">double</span>);
<a name="l00115"></a>00115
<a name="l00118"></a>00118 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(SlicingDirection,<span class="keywordtype">int</span>);
<a name="l00119"></a>00119 <a class="code" href="itkMacro_8h.html#7d989c13a1a213168db99ae0f84185d4">itkGetConstReferenceMacro</a>(SlicingDirection,<span class="keywordtype">int</span>);
<a name="l00121"></a>00121
<a name="l00124"></a>00124 <span class="keywordtype">void</span> GenerateSlabRegions(<span class="keywordtype">void</span>);
<a name="l00125"></a>00125
<a name="l00127"></a>00127 SlabRegionVectorType GetSlabRegionVector(<span class="keywordtype">void</span>);
<a name="l00128"></a>00128
<a name="l00129"></a>00129 <span class="keyword">protected</span>:
<a name="l00130"></a>00130 <a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">MRASlabIdentifier</a>();
<a name="l00131"></a><a class="code" href="classitk_1_1MRASlabIdentifier.html#5e739ecbcb42453f5999aada8efff2c7">00131</a> <span class="keyword">virtual</span> <a class="code" href="classitk_1_1MRASlabIdentifier.html#5e739ecbcb42453f5999aada8efff2c7">~MRASlabIdentifier</a>() {}
<a name="l00132"></a>00132 <span class="keywordtype">void</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#920ae03048a5ad715d803ca2e92b52de">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00133"></a>00133
<a name="l00134"></a>00134 <span class="keyword">private</span>:
<a name="l00135"></a>00135 <a class="code" href="classitk_1_1MRASlabIdentifier.html" title="identifies slab in MR images comparing minimum intensity averages">MRASlabIdentifier</a>(<span class="keyword">const</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ac7d0120fe5292cdcdddb6163b8cb150">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00136"></a>00136 <span class="keywordtype">void</span> operator=(<span class="keyword">const</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ac7d0120fe5292cdcdddb6163b8cb150">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00137"></a>00137
<a name="l00139"></a>00139 ImageConstPointer m_Image;
<a name="l00140"></a>00140
<a name="l00143"></a>00143 <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> m_NumberOfSamples;
<a name="l00144"></a>00144
<a name="l00145"></a>00145 <span class="keywordtype">int</span> m_SlicingDirection;
<a name="l00146"></a>00146 ImagePixelType m_BackgroundMinimumThreshold;
<a name="l00147"></a>00147 <span class="keywordtype">double</span> m_Tolerance;
<a name="l00148"></a>00148 SlabRegionVectorType m_Slabs;
<a name="l00149"></a>00149 };
<a name="l00150"></a>00150
<a name="l00151"></a>00151 } <span class="comment">// end namespace itk</span>
<a name="l00152"></a>00152
<a name="l00153"></a>00153
<a name="l00154"></a>00154 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00155"></a>00155 <span class="preprocessor"></span><span class="preprocessor">#include "itkMRASlabIdentifier.txx"</span>
<a name="l00156"></a>00156 <span class="preprocessor">#endif</span>
<a name="l00157"></a>00157 <span class="preprocessor"></span>
<a name="l00158"></a>00158 <span class="preprocessor">#endif </span><span class="comment">/* __itkMRASlabIdentifier_h */</span>
<a name="l00159"></a>00159
</pre></div></div>
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