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<h1>itkOptMeanSquaresImageToImageMetric.h</h1><a href="itkOptMeanSquaresImageToImageMetric_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment">  Program:   Insight Segmentation &amp; Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment">  Module:    $RCSfile: itkOptMeanSquaresImageToImageMetric.h,v $</span>
<a name="l00005"></a>00005 <span class="comment">  Language:  C++</span>
<a name="l00006"></a>00006 <span class="comment">  Date:      $Date: 2008-03-17 18:33:10 $</span>
<a name="l00007"></a>00007 <span class="comment">  Version:   $Revision: 1.4 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment">  Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment">  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment">     This software is distributed WITHOUT ANY WARRANTY; without even</span>
<a name="l00013"></a>00013 <span class="comment">     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR</span>
<a name="l00014"></a>00014 <span class="comment">     PURPOSE.  See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkOptMeanSquaresImageToImageMetric_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkOptMeanSquaresImageToImageMetric_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkOptImageToImageMetric_8h.html">itkOptImageToImageMetric.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkCovariantVector_8h.html">itkCovariantVector.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkPoint_8h.html">itkPoint.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkIndex_8h.html">itkIndex.h</a>"</span>
<a name="l00024"></a>00024 
<a name="l00025"></a>00025 <span class="preprocessor">#include "<a class="code" href="itkMultiThreader_8h.html">itkMultiThreader.h</a>"</span>
<a name="l00026"></a>00026 
<a name="l00027"></a>00027 <span class="keyword">namespace </span>itk
<a name="l00028"></a>00028 {
<a name="l00029"></a>00029 
<a name="l00030"></a>00030 <span class="keyword">template</span> &lt;<span class="keyword">class</span> TFixedImage,<span class="keyword">class</span> TMovingImage &gt;
<a name="l00031"></a>00031 <span class="keyword">class </span><a class="code" href="itkWin32Header_8h.html#7d4384322557205d75f0719c012dded6">ITK_EXPORT</a> MeanSquaresImageToImageMetric :
<a name="l00032"></a>00032     <span class="keyword">public</span> ImageToImageMetric&lt; TFixedImage, TMovingImage &gt;
<a name="l00033"></a>00033 {
<a name="l00034"></a>00034 <span class="keyword">public</span>:
<a name="l00035"></a>00035 
<a name="l00037"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#2f5939ace96bcad99c53b8fc08ab1ef6">00037</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html" title="Computes similarity between two objects to be registered.">MeanSquaresImageToImageMetric</a>                     <a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html" title="Computes similarity between two objects to be registered.">Self</a>;
<a name="l00038"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#8434c18e45230cee0cb4ea75086b3f48">00038</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ImageToImageMetric.html">ImageToImageMetric&lt; TFixedImage, TMovingImage &gt;</a>   <a class="code" href="classitk_1_1ImageToImageMetric.html">Superclass</a>;
<a name="l00039"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#f5ac7b83edc9a0ea576f0f42ece41b6c">00039</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer&lt;Self&gt;</a>                                <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00040"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#e92c916dbb57b6ed791dfc74f73afbf0">00040</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer&lt;const Self&gt;</a>                          <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00041"></a>00041 
<a name="l00043"></a>00043   <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html" title="Computes similarity between two objects to be registered.">Self</a>);
<a name="l00044"></a>00044 
<a name="l00046"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#78df15d0b22132110248915798dbba0a">00046</a>   <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html" title="Computes similarity between two objects to be registered.">MeanSquaresImageToImageMetric</a>, <a class="code" href="classitk_1_1ImageToImageMetric.html" title="Computes similarity between regions of two images.">ImageToImageMetric</a>);
<a name="l00047"></a>00047 
<a name="l00049"></a>00049   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Transform.html" title="Transform points and vector from an input space to an output space.">Superclass::TransformType</a>            <a class="code" href="classitk_1_1Transform.html" title="Transform points and vector from an input space to an output space.">TransformType</a>;
<a name="l00050"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#86b520de3c1334580dadde6f0ff28592">00050</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">Superclass::TransformPointer</a>         <a class="code" href="classitk_1_1SmartPointer.html">TransformPointer</a>;
<a name="l00051"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#5683b5077d700b7d78b3367b6967ddca">00051</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Array2D.html">Superclass::TransformJacobianType</a>    <a class="code" href="classitk_1_1Array2D.html">TransformJacobianType</a>;
<a name="l00052"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#c401fd0276875a150f5fe3cbe6c2488d">00052</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1InterpolateImageFunction.html" title="Base class for all image interpolaters.">Superclass::InterpolatorType</a>         <a class="code" href="classitk_1_1InterpolateImageFunction.html" title="Base class for all image interpolaters.">InterpolatorType</a>;
<a name="l00053"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#3cabed99a77a32d3e09bad1f2735b80a">00053</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::MeasureType              MeasureType;
<a name="l00054"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#d3c28f3b40eb5e88d01629989f04cc88">00054</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Array.html">Superclass::DerivativeType</a>           <a class="code" href="classitk_1_1Array.html">DerivativeType</a>;
<a name="l00055"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#30f98d27a2b167fa85ad9f46c8b5f929">00055</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Array.html" title="Array class with size defined at construction time.">Superclass::ParametersType</a>           <a class="code" href="classitk_1_1Array.html" title="Array class with size defined at construction time.">ParametersType</a>;
<a name="l00056"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#74c2db285a69641c766f5ec0981b7487">00056</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::FixedImageType           FixedImageType;
<a name="l00057"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#1beb5e3673243c5da837c1105825be04">00057</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::MovingImageType          MovingImageType;
<a name="l00058"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#e33d4bf5c8a5e0c8cc1e1e1939bf66b1">00058</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">Superclass::MovingImagePointType</a>     <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">MovingImagePointType</a>;
<a name="l00059"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#778a2cc2dde94147206123a7238fe9e1">00059</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::FixedImageConstPointer   FixedImageConstPointer;
<a name="l00060"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#40336bc2eff2d8800bb828391a342839">00060</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::MovingImageConstPointer  MovingImageConstPointer;
<a name="l00061"></a>00061   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::CoordinateRepresentationType
<a name="l00062"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#200074610fd08ebddba26b1ecf5c121d">00062</a>                                                    CoordinateRepresentationType;
<a name="l00063"></a>00063   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::FixedImageSampleContainer  
<a name="l00064"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#fc7b7be24d7a0c2d21cb080e7be1a3c1">00064</a>                                                       FixedImageSampleContainer;
<a name="l00065"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#377c3ebaa232c77b4373705e1deb41bd">00065</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">Superclass::ImageDerivativesType</a>     <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">ImageDerivativesType</a>;
<a name="l00066"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#4b9860b01ac71fc631ecf59d1393c419">00066</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::WeightsValueType         WeightsValueType;
<a name="l00067"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#a45187ac6a1a4064fc220a5c0a8b6fc4">00067</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::IndexValueType           IndexValueType;
<a name="l00068"></a>00068 
<a name="l00069"></a>00069   <span class="comment">// Needed for evaluation of Jacobian.</span>
<a name="l00070"></a><a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html#764973c379688920ffcfbfd8b2b95e00">00070</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">Superclass::FixedImagePointType</a>     <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">FixedImagePointType</a>;
<a name="l00071"></a>00071 
<a name="l00073"></a>00073   <a class="code" href="itkMacro_8h.html#1905cf6b2e88235996fa7ff73b2fb0eb">itkStaticConstMacro</a>( MovingImageDimension, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>,
<a name="l00074"></a>00074                        MovingImageType::ImageDimension );
<a name="l00075"></a>00075 
<a name="l00083"></a>00083   <span class="keyword">virtual</span> <span class="keywordtype">void</span> Initialize(<span class="keywordtype">void</span>) throw ( ExceptionObject );
<a name="l00084"></a>00084 
<a name="l00086"></a>00086   MeasureType GetValue( const <a class="code" href="classitk_1_1Array.html" title="Array class with size defined at construction time.">ParametersType</a> &amp; parameters ) const;
<a name="l00087"></a>00087 
<a name="l00089"></a>00089   <span class="keywordtype">void</span> GetDerivative( const <a class="code" href="classitk_1_1Array.html" title="Array class with size defined at construction time.">ParametersType</a> &amp; parameters,
<a name="l00090"></a>00090                       <a class="code" href="classitk_1_1Array.html">DerivativeType</a> &amp; Derivative ) const;
<a name="l00091"></a>00091 
<a name="l00093"></a>00093   <span class="keywordtype">void</span> GetValueAndDerivative( const <a class="code" href="classitk_1_1Array.html" title="Array class with size defined at construction time.">ParametersType</a> &amp; parameters,
<a name="l00094"></a>00094                               MeasureType &amp; Value,
<a name="l00095"></a>00095                               <a class="code" href="classitk_1_1Array.html">DerivativeType</a> &amp; Derivative ) const;
<a name="l00096"></a>00096 
<a name="l00097"></a>00097 protected:
<a name="l00098"></a>00098 
<a name="l00099"></a>00099   <a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html" title="Computes similarity between two objects to be registered.">MeanSquaresImageToImageMetric</a>();
<a name="l00100"></a>00100   virtual ~MeanSquaresImageToImageMetric();
<a name="l00101"></a>00101   <span class="keywordtype">void</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#920ae03048a5ad715d803ca2e92b52de">PrintSelf</a>(std::ostream&amp; os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) const;
<a name="l00102"></a>00102 
<a name="l00103"></a>00103 private:
<a name="l00104"></a>00104 
<a name="l00105"></a>00105   <span class="comment">//purposely not implemented</span>
<a name="l00106"></a>00106   MeanSquaresImageToImageMetric(const <a class="code" href="classitk_1_1MeanSquaresImageToImageMetric.html" title="Computes similarity between two objects to be registered.">Self</a> &amp;);
<a name="l00107"></a>00107   <span class="comment">//purposely not implemented</span>
<a name="l00108"></a>00108   <span class="keywordtype">void</span> operator=(const Self &amp;);
<a name="l00109"></a>00109 
<a name="l00110"></a>00110   inline <span class="keywordtype">bool</span> GetValueThreadProcessSample( <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> threadID,
<a name="l00111"></a>00111                                        <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> fixedImageSample,
<a name="l00112"></a>00112                                        const <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">MovingImagePointType</a> &amp; mappedPoint,
<a name="l00113"></a>00113                                        <span class="keywordtype">double</span> movingImageValue ) const;
<a name="l00114"></a>00114 
<a name="l00115"></a>00115   inline <span class="keywordtype">bool</span> GetValueAndDerivativeThreadProcessSample( <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> threadID,
<a name="l00116"></a>00116                                        <span class="keywordtype">unsigned</span> <span class="keywordtype">long</span> fixedImageSample,
<a name="l00117"></a>00117                                        const <a class="code" href="classitk_1_1Point.html" title="A templated class holding a geometric point in n-Dimensional space.">MovingImagePointType</a> &amp; mappedPoint,
<a name="l00118"></a>00118                                        <span class="keywordtype">double</span> movingImageValue,
<a name="l00119"></a>00119                                        const <a class="code" href="classitk_1_1CovariantVector.html" title="A templated class holding a n-Dimensional covariant vector.">ImageDerivativesType</a> &amp;
<a name="l00120"></a>00120                                                movingImageGradientValue ) const;
<a name="l00121"></a>00121 
<a name="l00122"></a>00122   MeasureType    * m_ThreaderMSE;
<a name="l00123"></a>00123   <a class="code" href="classitk_1_1Array.html">DerivativeType</a> * m_ThreaderMSEDerivatives;
<a name="l00124"></a>00124 
<a name="l00125"></a>00125 };
<a name="l00126"></a>00126 
<a name="l00127"></a>00127 } <span class="comment">// end namespace itk</span>
<a name="l00128"></a>00128 
<a name="l00129"></a>00129 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00130"></a>00130 <span class="preprocessor"></span><span class="preprocessor">#include "itkOptMeanSquaresImageToImageMetric.txx"</span>
<a name="l00131"></a>00131 <span class="preprocessor">#endif</span>
<a name="l00132"></a>00132 <span class="preprocessor"></span>
<a name="l00133"></a>00133 <span class="preprocessor">#endif</span>
<a name="l00134"></a>00134 <span class="preprocessor"></span>
</pre></div></div>
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