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<h1>itkPCAShapeSignedDistanceFunction.h</h1><a href="itkPCAShapeSignedDistanceFunction_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment"> Program: Insight Segmentation & Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment"> Module: $RCSfile: itkPCAShapeSignedDistanceFunction.h,v $</span>
<a name="l00005"></a>00005 <span class="comment"> Language: C++</span>
<a name="l00006"></a>00006 <span class="comment"> Date: $Date: 2009-02-19 19:41:22 $</span>
<a name="l00007"></a>00007 <span class="comment"> Version: $Revision: 1.10 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment"> Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment"> See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment"> This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment"> the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment"> PURPOSE. See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkPCAShapeSignedDistanceFunction_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkPCAShapeSignedDistanceFunction_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 <span class="preprocessor">#include "<a class="code" href="itkShapeSignedDistanceFunction_8h.html">itkShapeSignedDistanceFunction.h</a>"</span>
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkImage_8h.html">itkImage.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkInterpolateImageFunction_8h.html">itkInterpolateImageFunction.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkExtrapolateImageFunction_8h.html">itkExtrapolateImageFunction.h</a>"</span>
<a name="l00024"></a>00024 <span class="preprocessor">#include "<a class="code" href="itkTransform_8h.html">itkTransform.h</a>"</span>
<a name="l00025"></a>00025
<a name="l00026"></a>00026 <span class="keyword">namespace </span>itk
<a name="l00027"></a>00027 {
<a name="l00028"></a>00028
<a name="l00029"></a>00029
<a name="l00064"></a>00064 <span class="keyword">template</span>< <span class="keyword">typename</span> TCoordRep,
<a name="l00065"></a>00065 <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> VSpaceDimension,
<a name="l00066"></a>00066 <span class="keyword">typename</span> TImage = Image<double,VSpaceDimension> >
<a name="l00067"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html">00067</a> <span class="keyword">class </span><a class="code" href="itkWin32Header_8h.html#7d4384322557205d75f0719c012dded6">ITK_EXPORT</a> <a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html" title="Compute the signed distance from a N-dimensional PCA Shape.">PCAShapeSignedDistanceFunction</a> :
<a name="l00068"></a>00068 <span class="keyword">public</span> <a class="code" href="classitk_1_1ShapeSignedDistanceFunction.html" title="Base class for functions which evaluates the signed distance from a shape.">ShapeSignedDistanceFunction</a><TCoordRep, VSpaceDimension>
<a name="l00069"></a>00069 {
<a name="l00070"></a>00070
<a name="l00071"></a>00071 <span class="keyword">public</span>:
<a name="l00073"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#2005d9c96e8f098d329f6bd2c6379924">00073</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html" title="Compute the signed distance from a N-dimensional PCA Shape.">PCAShapeSignedDistanceFunction</a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>;
<a name="l00074"></a>00074 <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ShapeSignedDistanceFunction.html" title="Base class for functions which evaluates the signed distance from a shape.">ShapeSignedDistanceFunction</a><
<a name="l00075"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#7bad1c4c74891137bc580b19d4fa7ae5">00075</a> TCoordRep, VSpaceDimension> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Superclass</a>;
<a name="l00076"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#58421e269112f4f0404a643da0720700">00076</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<Self></a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00077"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#6c2f3347845f3581cc9866701e559871">00077</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer<const Self></a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00078"></a>00078
<a name="l00079"></a>00079
<a name="l00081"></a>00081 <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html" title="Compute the signed distance from a N-dimensional PCA Shape.">PCAShapeSignedDistanceFunction</a>, ShapeSignedDistancFunction);
<a name="l00082"></a>00082
<a name="l00084"></a>00084 <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>);
<a name="l00085"></a>00085
<a name="l00087"></a>00087 <a class="code" href="itkMacro_8h.html#1905cf6b2e88235996fa7ff73b2fb0eb">itkStaticConstMacro</a>(SpaceDimension,<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>,Superclass::SpaceDimension);
<a name="l00088"></a>00088
<a name="l00089"></a>00089
<a name="l00091"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#aa84f3b1f159aa8f694da880358d9104">00091</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::CoordRepType CoordRepType;
<a name="l00092"></a>00092
<a name="l00094"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#f29e6610a6804a65675d6a7c23f50589">00094</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::InputType InputType;
<a name="l00095"></a>00095
<a name="l00097"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#0ba37aa657867d9c5e24aa4fab9cacb4">00097</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::OutputType OutputType;
<a name="l00098"></a>00098
<a name="l00100"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#e8a44b848edc0cec45da307c64b5272d">00100</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::PointType PointType;
<a name="l00101"></a>00101
<a name="l00103"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#00f4a8d6fe500b61ffab2d761ea978e9">00103</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> Superclass::ParametersType ParametersType;
<a name="l00104"></a>00104
<a name="l00105"></a>00105
<a name="l00107"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#7c74361fb43874c8181464d5c0824c32">00107</a> <span class="keyword">typedef</span> TImage ImageType;
<a name="l00108"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#c4d365bac4e2cfef02a6bac6e3a77041">00108</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">ImageType::Pointer</a> ImagePointer;
<a name="l00109"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#f646d0dde8d8e70930e709c88ada6a08">00109</a> <span class="keyword">typedef</span> std::vector<ImagePointer> ImagePointerVector;
<a name="l00110"></a>00110
<a name="l00112"></a>00112 <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Transform.html" title="Transform points and vector from an input space to an output space.">Transform</a><CoordRepType,
<a name="l00113"></a>00113 <a class="code" href="itkMacro_8h.html#94ef2dc11d52c8ef0a78e34558feb8cb">itkGetStaticConstMacro</a>(SpaceDimension),
<a name="l00114"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#87448ba17096be4b4ce706840284ceaf">00114</a> <a class="code" href="itkMacro_8h.html#94ef2dc11d52c8ef0a78e34558feb8cb">itkGetStaticConstMacro</a>(SpaceDimension)> <a class="code" href="classitk_1_1Transform.html" title="Transform points and vector from an input space to an output space.">TransformType</a>;
<a name="l00115"></a>00115
<a name="l00117"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#fee400d614b904aa1e4e1e36713eaeb6">00117</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1InterpolateImageFunction.html" title="Base class for all image interpolaters.">InterpolateImageFunction<ImageType, CoordRepType></a> <a class="code" href="classitk_1_1InterpolateImageFunction.html" title="Base class for all image interpolaters.">InterpolatorType</a>;
<a name="l00118"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#8b978e6ed18a67a528d3b718c3decfec">00118</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">InterpolatorType::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">InterpolatorPointer</a>;
<a name="l00119"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#04802b8d92d4a7f8320b4e7e9b37c771">00119</a> <span class="keyword">typedef</span> std::vector<InterpolatorPointer> InterpolatorPointerVector;
<a name="l00120"></a>00120
<a name="l00122"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#8b93662af79a46fff4d33aa198ae4660">00122</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ExtrapolateImageFunction.html" title="Base class for all image extrapolaters.">ExtrapolateImageFunction<ImageType, CoordRepType></a> <a class="code" href="classitk_1_1ExtrapolateImageFunction.html" title="Base class for all image extrapolaters.">ExtrapolatorType</a>;
<a name="l00123"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#6d86f9e1ac096b3a531899808f14b7be">00123</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">ExtrapolatorType::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">ExtrapolatorPointer</a>;
<a name="l00124"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#0df69aedbe47b7d74ddc32b06eca68d0">00124</a> <span class="keyword">typedef</span> std::vector<ExtrapolatorPointer> ExtrapolatorPointerVector;
<a name="l00125"></a>00125
<a name="l00127"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#0dd770ed5df93c8f7b847db8fabb6485">00127</a> <span class="keyword">typedef</span> <a class="code" href="classitk_1_1ImageFunction.html" title="Evaluates a function of an image at specified position.">ImageFunction<ImageType, double, CoordRepType></a> <a class="code" href="classitk_1_1ImageFunction.html" title="Evaluates a function of an image at specified position.">FunctionType</a>;
<a name="l00128"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#b2af71426e887054d857e831732a131d">00128</a> <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">FunctionType::Pointer</a> <a class="code" href="classitk_1_1SmartPointer.html">FunctionPointer</a>;
<a name="l00129"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#bd98ebebdeebb6a53ad3180c45c4c66b">00129</a> <span class="keyword">typedef</span> std::vector<FunctionPointer> FunctionPointerVector;
<a name="l00130"></a>00130
<a name="l00131"></a>00131
<a name="l00134"></a>00134 <span class="keywordtype">void</span> SetNumberOfPrincipalComponents(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> n);
<a name="l00135"></a>00135 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(NumberOfPrincipalComponents, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span>);
<a name="l00137"></a>00137
<a name="l00139"></a>00139 <a class="code" href="itkMacro_8h.html#b950b763422e5059348e6178e2a5f425">itkSetObjectMacro</a>(MeanImage, ImageType);
<a name="l00140"></a>00140 <a class="code" href="itkMacro_8h.html#f6bef9ee7e4c077b96a08848ed4e7660">itkGetObjectMacro</a>(MeanImage, ImageType);
<a name="l00142"></a>00142
<a name="l00144"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#a75bf2cfb1c6de5a4a444dd857343b98">00144</a> <span class="keywordtype">void</span> SetPrincipalComponentImages(ImagePointerVector v)
<a name="l00145"></a>00145 { m_PrincipalComponentImages = v; }
<a name="l00146"></a>00146 <span class="comment">// ImagePointerVector & GetPrincipalComponentImages()</span>
<a name="l00147"></a>00147 <span class="comment">// { return m_PrincipalComponentImages; }</span>
<a name="l00149"></a>00149 <span class="comment"></span>
<a name="l00152"></a>00152 <a class="code" href="itkMacro_8h.html#7ebdd33cc5e7d74720ced9099c034faa">itkSetMacro</a>(PrincipalComponentStandardDeviations, ParametersType);
<a name="l00153"></a>00153 <a class="code" href="itkMacro_8h.html#1600305bb01e39e87c472d8bf29bd1cf">itkGetMacro</a>(PrincipalComponentStandardDeviations, ParametersType);
<a name="l00155"></a>00155
<a name="l00157"></a>00157 <a class="code" href="itkMacro_8h.html#b950b763422e5059348e6178e2a5f425">itkSetObjectMacro</a>(<a class="code" href="classitk_1_1Transform.html" title="Transform points and vector from an input space to an output space.">Transform</a>, <a class="code" href="namespaceitk_1_1QuaternionOrientationAdapterClasses.html#a5e70a2d931fb2ba778aa66f844c8522">TransformType</a>);
<a name="l00158"></a>00158 <a class="code" href="itkMacro_8h.html#f6bef9ee7e4c077b96a08848ed4e7660">itkGetObjectMacro</a>(<a class="code" href="classitk_1_1Transform.html" title="Transform points and vector from an input space to an output space.">Transform</a>, <a class="code" href="namespaceitk_1_1QuaternionOrientationAdapterClasses.html#a5e70a2d931fb2ba778aa66f844c8522">TransformType</a>);
<a name="l00160"></a>00160
<a name="l00161"></a>00161
<a name="l00163"></a>00163 <span class="keyword">virtual</span> <span class="keywordtype">void</span> SetParameters( <span class="keyword">const</span> ParametersType & );
<a name="l00164"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#ff396e322a3c84cd6289a30da33f6b91">00164</a> <span class="keyword">virtual</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> GetNumberOfShapeParameters(<span class="keywordtype">void</span>)<span class="keyword"> const</span>
<a name="l00165"></a>00165 <span class="keyword"> </span>{ <span class="keywordflow">return</span> m_NumberOfPrincipalComponents; }
<a name="l00166"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#37a37b690127e30b5b53bcc8b8b0723d">00166</a> <span class="keyword">virtual</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> GetNumberOfPoseParameters(<span class="keywordtype">void</span>)<span class="keyword"> const</span>
<a name="l00167"></a>00167 <span class="keyword"> </span>{ <span class="keywordflow">return</span> m_Transform ? m_Transform->GetNumberOfParameters() : 0; }
<a name="l00169"></a>00169
<a name="l00171"></a>00171 <span class="keyword">virtual</span> OutputType Evaluate(<span class="keyword">const</span> PointType& point) <span class="keyword">const</span>;
<a name="l00172"></a>00172
<a name="l00175"></a>00175 <span class="keyword">virtual</span> <span class="keywordtype">void</span> Initialize() throw ( ExceptionObject );
<a name="l00176"></a>00176
<a name="l00177"></a>00177
<a name="l00178"></a>00178 protected:
<a name="l00179"></a>00179 <a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html" title="Compute the signed distance from a N-dimensional PCA Shape.">PCAShapeSignedDistanceFunction</a>();
<a name="l00180"></a><a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html#79439bb783198ab9c1b4f37681aeedec">00180</a> ~PCAShapeSignedDistanceFunction(){};
<a name="l00181"></a>00181
<a name="l00182"></a>00182 <span class="keywordtype">void</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#920ae03048a5ad715d803ca2e92b52de">PrintSelf</a>(std::ostream& os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00183"></a>00183
<a name="l00184"></a>00184
<a name="l00185"></a>00185 <span class="keyword">private</span>:
<a name="l00186"></a>00186 <a class="code" href="classitk_1_1PCAShapeSignedDistanceFunction.html" title="Compute the signed distance from a N-dimensional PCA Shape.">PCAShapeSignedDistanceFunction</a>(<span class="keyword">const</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ac7d0120fe5292cdcdddb6163b8cb150">Self</a>&); <span class="comment">//purposely not implemented</span>
<a name="l00187"></a>00187 <span class="keywordtype">void</span> operator=( <span class="keyword">const</span> <a class="code" href="namespaceHardConnectedComponentImageFilter.html#ac7d0120fe5292cdcdddb6163b8cb150">Self</a>& ); <span class="comment">//purposely not implemented</span>
<a name="l00188"></a>00188
<a name="l00189"></a>00189
<a name="l00191"></a>00191 <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> m_NumberOfPrincipalComponents;
<a name="l00192"></a>00192 <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> m_NumberOfTransformParameters;
<a name="l00193"></a>00193
<a name="l00194"></a>00194 ImagePointer m_MeanImage;
<a name="l00195"></a>00195 ImagePointerVector m_PrincipalComponentImages;
<a name="l00196"></a>00196 ParametersType m_PrincipalComponentStandardDeviations;
<a name="l00197"></a>00197
<a name="l00199"></a>00199 <span class="keyword">typename</span> <a class="code" href="itkFEMMacro_8h.html#539cce1a3282ba59952dedcbf9cdb23f">TransformType::Pointer</a> m_Transform;
<a name="l00200"></a>00200 InterpolatorPointerVector m_Interpolators;
<a name="l00201"></a>00201 ExtrapolatorPointerVector m_Extrapolators;
<a name="l00202"></a>00202 <span class="keyword">mutable</span> FunctionPointerVector m_Selectors;
<a name="l00203"></a>00203
<a name="l00205"></a>00205 ParametersType m_WeightOfPrincipalComponents;
<a name="l00206"></a>00206 ParametersType m_TransformParameters;
<a name="l00207"></a>00207
<a name="l00208"></a>00208 };
<a name="l00209"></a>00209
<a name="l00210"></a>00210 } <span class="comment">// end namespace itk</span>
<a name="l00211"></a>00211
<a name="l00212"></a>00212 <span class="comment">// Define instantiation macro for this template.</span>
<a name="l00213"></a><a class="code" href="itkPCAShapeSignedDistanceFunction_8h.html#7edc8c19880b48b8325cdeaf24f6a63b">00213</a> <span class="preprocessor">#define ITK_TEMPLATE_PCAShapeSignedDistanceFunction(_, EXPORT, x, y) namespace itk { \</span>
<a name="l00214"></a>00214 <span class="preprocessor"> _(3(class EXPORT PCAShapeSignedDistanceFunction< ITK_TEMPLATE_3 x >)) \</span>
<a name="l00215"></a>00215 <span class="preprocessor"> namespace Templates { typedef PCAShapeSignedDistanceFunction< ITK_TEMPLATE_3 x > \</span>
<a name="l00216"></a>00216 <span class="preprocessor"> PCAShapeSignedDistanceFunction##y; } \</span>
<a name="l00217"></a>00217 <span class="preprocessor"> }</span>
<a name="l00218"></a>00218 <span class="preprocessor"></span>
<a name="l00219"></a>00219 <span class="preprocessor">#if ITK_TEMPLATE_EXPLICIT</span>
<a name="l00220"></a>00220 <span class="preprocessor"></span><span class="preprocessor"># include "Templates/itkPCAShapeSignedDistanceFunction+-.h"</span>
<a name="l00221"></a>00221 <span class="preprocessor">#endif</span>
<a name="l00222"></a>00222 <span class="preprocessor"></span>
<a name="l00223"></a>00223 <span class="preprocessor">#if ITK_TEMPLATE_TXX</span>
<a name="l00224"></a>00224 <span class="preprocessor"></span><span class="preprocessor"># include "itkPCAShapeSignedDistanceFunction.txx"</span>
<a name="l00225"></a>00225 <span class="preprocessor">#endif</span>
<a name="l00226"></a>00226 <span class="preprocessor"></span>
<a name="l00227"></a>00227 <span class="preprocessor">#endif</span>
<a name="l00228"></a>00228 <span class="preprocessor"></span>
</pre></div></div>
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