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<h1>itkScalarImageToHistogramGenerator.h</h1><a href="itkScalarImageToHistogramGenerator_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="comment">/*=========================================================================</span>
<a name="l00002"></a>00002 <span class="comment"></span>
<a name="l00003"></a>00003 <span class="comment">  Program:   Insight Segmentation &amp; Registration Toolkit</span>
<a name="l00004"></a>00004 <span class="comment">  Module:    $RCSfile: itkScalarImageToHistogramGenerator.h,v $</span>
<a name="l00005"></a>00005 <span class="comment">  Language:  C++</span>
<a name="l00006"></a>00006 <span class="comment">  Date:      $Date: 2009-01-16 11:37:58 $</span>
<a name="l00007"></a>00007 <span class="comment">  Version:   $Revision: 1.9 $</span>
<a name="l00008"></a>00008 <span class="comment"></span>
<a name="l00009"></a>00009 <span class="comment">  Copyright (c) Insight Software Consortium. All rights reserved.</span>
<a name="l00010"></a>00010 <span class="comment">  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.</span>
<a name="l00011"></a>00011 <span class="comment"></span>
<a name="l00012"></a>00012 <span class="comment">     This software is distributed WITHOUT ANY WARRANTY; without even </span>
<a name="l00013"></a>00013 <span class="comment">     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR </span>
<a name="l00014"></a>00014 <span class="comment">     PURPOSE.  See the above copyright notices for more information.</span>
<a name="l00015"></a>00015 <span class="comment"></span>
<a name="l00016"></a>00016 <span class="comment">=========================================================================*/</span>
<a name="l00017"></a>00017 <span class="preprocessor">#ifndef __itkScalarImageToHistogramGenerator_h</span>
<a name="l00018"></a>00018 <span class="preprocessor"></span><span class="preprocessor">#define __itkScalarImageToHistogramGenerator_h</span>
<a name="l00019"></a>00019 <span class="preprocessor"></span>
<a name="l00020"></a>00020 
<a name="l00021"></a>00021 <span class="preprocessor">#include "<a class="code" href="itkScalarImageToListAdaptor_8h.html">itkScalarImageToListAdaptor.h</a>"</span>
<a name="l00022"></a>00022 <span class="preprocessor">#include "<a class="code" href="itkListSampleToHistogramGenerator_8h.html">itkListSampleToHistogramGenerator.h</a>"</span>
<a name="l00023"></a>00023 <span class="preprocessor">#include "<a class="code" href="itkObject_8h.html">itkObject.h</a>"</span>
<a name="l00024"></a>00024 
<a name="l00025"></a>00025 
<a name="l00026"></a>00026 <span class="keyword">namespace </span>itk {
<a name="l00027"></a>00027 <span class="keyword">namespace </span>Statistics {
<a name="l00028"></a>00028 
<a name="l00033"></a>00033 <span class="keyword">template</span>&lt; <span class="keyword">class</span> TImageType &gt;
<a name="l00034"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html">00034</a> <span class="keyword">class </span><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html" title="TODO.">ScalarImageToHistogramGenerator</a> : <span class="keyword">public</span> <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Object</a>
<a name="l00035"></a>00035 {
<a name="l00036"></a>00036 <span class="keyword">public</span>:
<a name="l00038"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2f9dd5073d1faced4484113b31d76c4f">00038</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html" title="TODO.">ScalarImageToHistogramGenerator</a>  <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a> ;
<a name="l00039"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#ff4021d32595c8964d07f1218fb3d87f">00039</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Object</a> <a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Superclass</a>;
<a name="l00040"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#de400325250099e688515135b0613be7">00040</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer&lt;Self&gt;</a> <a class="code" href="classitk_1_1SmartPointer.html">Pointer</a>;
<a name="l00041"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#ca1407444c518909d2d44354b6eb55f8">00041</a>   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1SmartPointer.html">SmartPointer&lt;const Self&gt;</a> <a class="code" href="classitk_1_1SmartPointer.html">ConstPointer</a>;
<a name="l00042"></a>00042 
<a name="l00044"></a>00044   <a class="code" href="itkMacro_8h.html#574c1f86661d409dd32c742307a0e96a">itkTypeMacro</a>(<a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html" title="TODO.">ScalarImageToHistogramGenerator</a>, <a class="code" href="classitk_1_1Object.html" title="Base class for most itk classes.">Object</a>) ;
<a name="l00045"></a>00045 
<a name="l00047"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#0d4716b889a6806e4a37f0e9665aee77">00047</a>   <a class="code" href="itkMacro_8h.html#0fdc15685afa271857c57e7cd482f30c">itkNewMacro</a>(<a class="code" href="classitk_1_1LightObject.html" title="Light weight base class for most itk classes.">Self</a>) ;
<a name="l00048"></a>00048 
<a name="l00049"></a>00049   <span class="keyword">typedef</span> TImageType                                      <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#0d4716b889a6806e4a37f0e9665aee77">ImageType</a>;
<a name="l00050"></a>00050   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToListAdaptor.html" title="This class provides ListSampleBase interfaces to ITK Image.">itk::Statistics::ScalarImageToListAdaptor</a>&lt; 
<a name="l00051"></a>00051                                               <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#0d4716b889a6806e4a37f0e9665aee77">ImageType</a> 
<a name="l00052"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#b7c0361fe25062decca4ca8d414eace0">00052</a>                                                       &gt;   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToListAdaptor.html" title="This class provides ListSampleBase interfaces to ITK Image.">AdaptorType</a>;
<a name="l00053"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#fa50bd6312a6e976d4cf1c3f12dd851e">00053</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">AdaptorType::Pointer</a>                   <a class="code" href="classitk_1_1SmartPointer.html">AdaptorPointer</a>;
<a name="l00054"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#a68862e6b8d5c3d3599caf59975f0859">00054</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> ImageType::PixelType                   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#a68862e6b8d5c3d3599caf59975f0859">PixelType</a>;
<a name="l00055"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2fed4245aaa030e5849e913278e0c96f">00055</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> NumericTraits&lt; PixelType &gt;::RealType   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2fed4245aaa030e5849e913278e0c96f">RealPixelType</a>;
<a name="l00056"></a>00056 
<a name="l00057"></a>00057   <span class="keyword">typedef</span> <a class="code" href="classitk_1_1Statistics_1_1ListSampleToHistogramGenerator.html" title="Generates a Histogram using the data from the ListSample object.">itk::Statistics::ListSampleToHistogramGenerator</a>&lt; 
<a name="l00058"></a>00058                                   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToListAdaptor.html" title="This class provides ListSampleBase interfaces to ITK Image.">AdaptorType</a>, 
<a name="l00059"></a>00059                                   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2fed4245aaa030e5849e913278e0c96f">RealPixelType</a>,
<a name="l00060"></a>00060                                   <a class="code" href="classitk_1_1Statistics_1_1DenseFrequencyContainer.html" title="his class is a container for frequencies of bins in an histogram.">DenseFrequencyContainer</a>
<a name="l00061"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#fa69db7954320f867dda832726134ac1">00061</a>                                                           &gt; <a class="code" href="classitk_1_1Statistics_1_1ListSampleToHistogramGenerator.html" title="Generates a Histogram using the data from the ListSample object.">GeneratorType</a>;
<a name="l00062"></a>00062 
<a name="l00063"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#16e283ec5ecde99d85495f2523dde558">00063</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">GeneratorType::Pointer</a>                   <a class="code" href="classitk_1_1SmartPointer.html">GeneratorPointer</a>;
<a name="l00064"></a>00064 
<a name="l00065"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#3b9747de01cad60211552a1209ec7024">00065</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1Statistics_1_1Histogram.html" title="This class stores measurement vectors in the context of n-dimensional histogram.">GeneratorType::HistogramType</a>             <a class="code" href="classitk_1_1Statistics_1_1Histogram.html" title="This class stores measurement vectors in the context of n-dimensional histogram.">HistogramType</a>;
<a name="l00066"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#ebd9143bb65a1c4ba8ac8a8b6eaa25c4">00066</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">HistogramType::Pointer</a>                   <a class="code" href="classitk_1_1SmartPointer.html">HistogramPointer</a>;
<a name="l00067"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#5003c329475bf2bbd624c7bb6af2d390">00067</a>   <span class="keyword">typedef</span> <span class="keyword">typename</span> <a class="code" href="classitk_1_1SmartPointer.html">HistogramType::ConstPointer</a>              <a class="code" href="classitk_1_1SmartPointer.html">HistogramConstPointer</a>;
<a name="l00068"></a>00068 
<a name="l00069"></a>00069 <span class="keyword">public</span>:
<a name="l00070"></a>00070 
<a name="l00072"></a>00072   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#62628c5e1476c0a4316ebffb74f93b58">Compute</a>( <span class="keywordtype">void</span> );
<a name="l00073"></a>00073 
<a name="l00075"></a>00075   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#178380f3343f000e4fc2810d56257631">SetInput</a>( <span class="keyword">const</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#0d4716b889a6806e4a37f0e9665aee77">ImageType</a> * );
<a name="l00076"></a>00076 
<a name="l00080"></a>00080   <span class="keyword">const</span> <a class="code" href="classitk_1_1Statistics_1_1Histogram.html" title="This class stores measurement vectors in the context of n-dimensional histogram.">HistogramType</a> * <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#a9acd5d771c5384f1303b6eba86331a8">GetOutput</a>() <span class="keyword">const</span>;
<a name="l00081"></a>00081 
<a name="l00083"></a>00083   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#64229ea6d4f709402bf7e14247921ad2">SetNumberOfBins</a>( <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> numberOfBins );
<a name="l00084"></a>00084 
<a name="l00086"></a>00086   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#7f27a8346aac8826b85558c6ddb29f06">SetMarginalScale</a>( <span class="keywordtype">double</span> marginalScale );
<a name="l00087"></a>00087 
<a name="l00089"></a>00089   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#a9af694261ef7010ea4208b23d113b92">SetHistogramMin</a>( <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2fed4245aaa030e5849e913278e0c96f">RealPixelType</a> minimumValue );
<a name="l00090"></a>00090 
<a name="l00092"></a>00092   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#138a28e42b0adb715a19dbf92e15708d">SetHistogramMax</a>( <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2fed4245aaa030e5849e913278e0c96f">RealPixelType</a> maximumValue );
<a name="l00093"></a>00093 
<a name="l00094"></a>00094 <span class="keyword">protected</span>:
<a name="l00095"></a>00095   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#6ff39bcbfa7f3276bcc1afd206ac8bed">ScalarImageToHistogramGenerator</a>();
<a name="l00096"></a><a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#8ef322591daed5f39d4bc7ae9c8d2f64">00096</a>   <span class="keyword">virtual</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#8ef322591daed5f39d4bc7ae9c8d2f64">~ScalarImageToHistogramGenerator</a>() {};
<a name="l00097"></a>00097   <span class="keywordtype">void</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#8a474d14efa90ee7dfba78bccbd24b55">PrintSelf</a>(std::ostream&amp; os, <a class="code" href="classitk_1_1Indent.html" title="Control indentation during Print() invocation.">Indent</a> indent) <span class="keyword">const</span>;
<a name="l00098"></a>00098 
<a name="l00099"></a>00099 
<a name="l00100"></a>00100 <span class="keyword">private</span>:
<a name="l00101"></a>00101 
<a name="l00102"></a>00102   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#fa50bd6312a6e976d4cf1c3f12dd851e">AdaptorPointer</a>      m_ImageToListAdaptor;
<a name="l00103"></a>00103 
<a name="l00104"></a>00104   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#16e283ec5ecde99d85495f2523dde558">GeneratorPointer</a>    m_HistogramGenerator;
<a name="l00105"></a>00105   
<a name="l00106"></a>00106   <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#6ff39bcbfa7f3276bcc1afd206ac8bed">ScalarImageToHistogramGenerator</a>(<span class="keyword">const</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2f9dd5073d1faced4484113b31d76c4f">Self</a>&amp;); <span class="comment">//purposely not implemented</span>
<a name="l00107"></a>00107   <span class="keywordtype">void</span> operator=(<span class="keyword">const</span> <a class="code" href="classitk_1_1Statistics_1_1ScalarImageToHistogramGenerator.html#2f9dd5073d1faced4484113b31d76c4f">Self</a>&amp;); <span class="comment">//purposely not implemented</span>
<a name="l00108"></a>00108 };
<a name="l00109"></a>00109 
<a name="l00110"></a>00110 
<a name="l00111"></a>00111 } <span class="comment">// end of namespace Statistics </span>
<a name="l00112"></a>00112 } <span class="comment">// end of namespace itk </span>
<a name="l00113"></a>00113 
<a name="l00114"></a>00114 <span class="preprocessor">#ifndef ITK_MANUAL_INSTANTIATION</span>
<a name="l00115"></a>00115 <span class="preprocessor"></span><span class="preprocessor">#include "itkScalarImageToHistogramGenerator.txx"</span>
<a name="l00116"></a>00116 <span class="preprocessor">#endif</span>
<a name="l00117"></a>00117 <span class="preprocessor"></span>
<a name="l00118"></a>00118 <span class="preprocessor">#endif</span>
<a name="l00119"></a>00119 <span class="preprocessor"></span>
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